| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4611 |
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| Symbol | |
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| ID | 5149726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 4833693 |
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| End bp | 4835540 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640559411 |
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| Product | TPR domain-containing protein |
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| Protein accession | YP_001240545 |
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| Protein GI | 148255960 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0457] FOG: TPR repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.100536 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCGCA GCGACCGGAA GCAAGGCGGC AAGAGCGTGG CAGGCGGCTC GGATGGCGTG
CCCACCCTTT CGCCTGCCGC GCTGTACGAG GCCGGACTGC ATCACCTCGG CGCAGGCCAG
CTGCTCGATG CCCAGCTGTG CTGCCAGCAG GCGCTCGAGC TCGATCCCGG CCACGCCGAC
AGCCTCTATC TGATGGGCCT GATCTCGCTG CAGTCGCGGC AACACGATCA CGCCGTGGCT
TGGCTTTCGC AGGCCATCCG GCAGACGCCA AAGATCGACT ATCTGACCAG CCTCGGCTTC
ACGCTCAAGC AGATGGGCCG GCTCGACGAT GCGCTGGCGG TGTTCGACAA GGCCATTCAG
CTCAAACCGG ATGATGCCGA ATTGTGGAAG CATCTCGGCG GCGTGCTCCT GGCGCTCGAT
CGCGGCGCCG AAGCATTGCT GAGTTACCAG CATGCGCTCT CGATTGATCC CGCTCACAAG
GAGGCCGCGT TCCAGAGCGG ACTGCTGCTG CACCAGCAGC AGCGCGACGC GGAGGCCGTC
GAGGCGTTTA CCGTCTGCCT CACGCAGCAG CCGAACGACC TGACGGCGCT GCAGATGCGC
GCCAAATGCC TCCGCAAGCT GAACCGTTAC CCGGACTATC TCGCCGATAC AGAGCGCGCA
TCGACGCTCG CGCCGGCCGA TCCGCTGGCC TGCAACAATG TCGGCGACGC GCTTGTCTGT
CTCGGCCGTC ACGCAGAGGC GCTGAGCTGG TTCGACCGTG CGCTGAGCTT GCAGCCGGGC
ATGATCGAGG TGCTGCTCAA CAAGGGCTTT GCGCTGTTGC AGCTGCGGCG CTTCGCCGAC
GCGGCCGACG TCTATCAGAA GATCCTTGCC ATAGATCCTG GCAATGCCAA GGCCGCTTGG
CAGCTCGCCC ATGTCGAGTT GCAATGCGGC GACTACGTCT CCGGCTGGGC CCGGCGCGAG
GCACGCTGGA ACATGCCGGA TTTCTCGCCC GAATATCCGC GTTTCGCCGC GCCGAAATGG
CTCGGCAATG AGGACATCAG CGGCAAGACC ATCCTCATCG AGGAGGACGA AGGCTTTGGC
GACACCATTC AGTTTGCCCG CTACATCCCC CAGGTCGCGG CGCGCGGCGC CAAGGTCATC
CTGGTGGTCC GCGAGGCGCT GCGGCCGCTG ATGACGGGCA TTGCAGGCGT CTCGCAATGT
CTCGCCTTCA AGCCGGAGCT GCAGCGCCCG GCCTTCGACA TGCATTGTCC GGTGATGAGC
CTGCCGCTCG CCTTTGGAAC CACGCTGGAG ACCATCCCGC CCGCGACCTA TTTGCCGCCG
CCGCCGGCCG ACCGTGTGTC GGCCTGGGAG CAGCGGCTGG GATCGCATCA ACGGCTGCGG
GTCGGCCTTG TCTGGTCCGG CAATCCGCAC CAGGGCAACG ATCGTCACCG CTCGATGCCA
CTTTCGACGC TGCTGCCACT GCTGGATCTC GATGCCGATT TCATCAGCCT GCAGAAAGAG
CCGCGGCCGG CAGACCAGGC CCTGCTGATT CAGCAGAGCC GTATCATCGA CGTCAGTGGC
GATCTGACCG ACTTCGTCGA GACCGCCGCG CTGATCTCCT GCCTCGACGT CGTCATCAGC
GTTTGCACCA GCGTGGCCCA CCTCGCCGCC ACGCTGGGTC GTCCGACCTG GATCATGCTG
CCCTACCTCG CCGACTGGCG ATGGCTGCGT GATCGCGACG ACAGCCCGTG GTACGGTAGC
GCCCGGCTGT TCCACCAGGA TGCAAGCTGC CGCTACGAGC CGGTCGTTGA GCGCGTGCGC
GCCGAGCTGA CGACCGCGAT CGCCGGATTC GGGCCTCGAG CCGCCTAG
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| Protein sequence | MGRSDRKQGG KSVAGGSDGV PTLSPAALYE AGLHHLGAGQ LLDAQLCCQQ ALELDPGHAD
SLYLMGLISL QSRQHDHAVA WLSQAIRQTP KIDYLTSLGF TLKQMGRLDD ALAVFDKAIQ
LKPDDAELWK HLGGVLLALD RGAEALLSYQ HALSIDPAHK EAAFQSGLLL HQQQRDAEAV
EAFTVCLTQQ PNDLTALQMR AKCLRKLNRY PDYLADTERA STLAPADPLA CNNVGDALVC
LGRHAEALSW FDRALSLQPG MIEVLLNKGF ALLQLRRFAD AADVYQKILA IDPGNAKAAW
QLAHVELQCG DYVSGWARRE ARWNMPDFSP EYPRFAAPKW LGNEDISGKT ILIEEDEGFG
DTIQFARYIP QVAARGAKVI LVVREALRPL MTGIAGVSQC LAFKPELQRP AFDMHCPVMS
LPLAFGTTLE TIPPATYLPP PPADRVSAWE QRLGSHQRLR VGLVWSGNPH QGNDRHRSMP
LSTLLPLLDL DADFISLQKE PRPADQALLI QQSRIIDVSG DLTDFVETAA LISCLDVVIS
VCTSVAHLAA TLGRPTWIML PYLADWRWLR DRDDSPWYGS ARLFHQDASC RYEPVVERVR
AELTTAIAGF GPRAA
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