| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4589 |
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| Symbol | |
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| ID | 5149115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4809234 |
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| End bp | 4810463 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640559390 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001240524 |
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| Protein GI | 148255939 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.365756 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTCG ACAGCATGAC GCTCGACATC GTAGCGACTA TGGTCGCGGC GCTGCTTGGC
GCGATGTTGC TGCACTTCGG ACGGCAGGAG AACACGCCGG CACTGCGCTG GTGGGGCGCG
GCCTACATTC TCGGCGCGGT CGCGATCGCG CTGTGGACCT TGGTCGGCGA GGTCTATGGC
GTGGTGGTGT CGCTGTTTCT CAGCGCGATC GGGCTGGTCG CAACCGCGAT GGTCTGGAAC
GCCGCGCGCG TCTTCCACGG CAAGCCGCCG AGCGTGATCG GCCTGGTGCT CGGCGCGCTG
GTGTGGATCA CGAGCGGCAT GCTGCTCGAC CCGGCCGCAC AGTCGCTCCG CCTGACCATC
GGCGCCGCCA TCGTCGTGAT CTACGCCATG CTGACGGCGG CCGAGCTCTG GCAGGAGCGG
CGGCGCACGC TGCATCGGCG CTGGCCGGCG CTGATCGTGC CGGCGATGCA TGGCTTCGTG
CTGATGCTGC CGATCCTGCT CGGCAACATG CTGCGCGACG CCGATGGTGC CTTCGCGGCC
GCCTGGGTGA CGATCTTCTC GATCGAGCTG GTGCTGTATG CGGTCGGCAC GGTGTTCGTG
ATCTTCATGC TGGTGTCGGA GCGCATCGTC AGTGCGCATA AGCGCGCCGC CACCACCGAC
CCGCTCACGG GCCTGCTCAA TCGTCGCGGC TTTGCGGACG CCTGCGCGCA GCTGATTGCC
CGCGAGGCGC GCGAGCAGCG GCCGGTCAGC GTGCTGATCT TCGACATCGA TCATTTCAAA
TCCATCAATG ACCGGTTCGG CCACGCCGAA GGCGACACGG TGCTGAAGCT GTTCGCGGAT
GTCGTGGTCA ACAATCTGCG TCTCACCGAT CTCTCTGGGC GGATCGGCGG CGAGGAGTTC
GCAGCGCTGC TGCCCTGTTC GATCGAGGAG GCGATGGTCG CCGCCGAGCG CGTCCGCGAG
GCGTTCGCGG CGTCCGGCGT GGTCTGCGAG GAGAAGCCGG TCGACACCAC CGTGAGCATC
GGCGTCGCCG GCGGCCCGGC GGGAACCGAG CTCGACGTGC TGCTCGCGGC CGCCGACACC
GCGCTCTACA AGGCCAAGCG GTCGGGCCGC AACCGCGTCG AGGCGGCGTC CGAATTGCCG
CTGTCGCTGG AGCGCTACCG GCGTCAGCGG GCCGCCGCAG CGGCCGGAGC GCCACCGGTG
CAGCCGGGGC AGGCGGTGGT GTCGAGCTGA
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| Protein sequence | MALDSMTLDI VATMVAALLG AMLLHFGRQE NTPALRWWGA AYILGAVAIA LWTLVGEVYG
VVVSLFLSAI GLVATAMVWN AARVFHGKPP SVIGLVLGAL VWITSGMLLD PAAQSLRLTI
GAAIVVIYAM LTAAELWQER RRTLHRRWPA LIVPAMHGFV LMLPILLGNM LRDADGAFAA
AWVTIFSIEL VLYAVGTVFV IFMLVSERIV SAHKRAATTD PLTGLLNRRG FADACAQLIA
REAREQRPVS VLIFDIDHFK SINDRFGHAE GDTVLKLFAD VVVNNLRLTD LSGRIGGEEF
AALLPCSIEE AMVAAERVRE AFAASGVVCE EKPVDTTVSI GVAGGPAGTE LDVLLAAADT
ALYKAKRSGR NRVEAASELP LSLERYRRQR AAAAAGAPPV QPGQAVVSS
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