Gene BBta_4577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4577 
Symbol 
ID5155967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4797744 
End bp4798826 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content67% 
IMG OID640559378 
Productputative mandelate racemase/muconate lactonizing family protein 
Protein accessionYP_001240512 
Protein GI148255927 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.145361 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTG CCGCCATCAC CGGCGTCACC GCGCGAGCCG TGATCACGCC GATGAAGCGT 
CCGCTGCGCA ACGCCTTCGG CGTCATCGAC ACCGGCCCCC TGGTGCTGAT CGACGTCGCG
ACCGATCAGG GGGTTACGGG CCACTCTTAT CTGTTTGCCT ACACCAGGCT CGCGCTGAAG
CCGCTGGTGC TCTTGGTCGA GGAGATCGGC CGCGAGCTCA CCGGCAAGGC GCTGGTCCCG
ATCGATCTGA TGAAGCTCAT GGACGCAAAA TTCCGGCTGC TCGGCTGGCA GGGGCTGGTC
GGCATGGCGG TGTCCGGTCT CGACATGGCG TTCTGGGATG CGCTGGGTCA GATCGCCGGC
AAGCCGGTGG TCGAGCTGCT TGGCGGCGCT GCGCGGCCGA TTCCCGCCTA TGACAGCTAT
GGCGTGCTCG ACGCCAAAGC CGACGCGCGC ACCCTGCGCA CGGCCTGCGA CGAGCACGGC
TTCCGCGCCA TCAAGACCAA AGGCGGCCAT GGCGACCTCG CCACCGACGC GGCGATGATC
GAGGGCCTGC GCACGTTGCT CGGCCCCGAC ATCGCGCTGA TGCTCGACTT CAACCAGTCG
CTGGATCCCG CGGAAGCGAC GCGCAGAATC ACGCGCCTTG CGAATTACGA TTTGACCTGG
ATCGAGGAGC CGGTGCCGCA GGAAAACCTG TCCGGTCACG CCCAGGTGCG CGAGCGCTCG
GACATTCCGA TCCAGGCCGG TGAGAACTGG TGGTTTCCGC GCGGCTTCGC CGAGGCGATC
GCGGCCGGCG CCTCCGACTT CATCATGCCC GATCTGATGA AGGTCGGCGG CATCACCGGC
TGGCTCAATG TCGCAGGCCA GGCCGACGCG GCCTCGATCC CGATGTCCAG CCACATCCTG
CCCGAGGCCA GCGCGCATGT GCTGGCGGTG ACGCCGACGG CGCACTTCCT GGAGGTGCTC
GACGTCGCCG GCGCCATCCT CGCCGAGCCG CTGCAGGTGA TCGACGGCAA GGTAACCGCG
CGAGGGCCCG GATTGGGGCT CGCCTGGAAC GAGCCCGCGG TCGCGAAATA TCAGGTGCAG
TGA
 
Protein sequence
MTIAAITGVT ARAVITPMKR PLRNAFGVID TGPLVLIDVA TDQGVTGHSY LFAYTRLALK 
PLVLLVEEIG RELTGKALVP IDLMKLMDAK FRLLGWQGLV GMAVSGLDMA FWDALGQIAG
KPVVELLGGA ARPIPAYDSY GVLDAKADAR TLRTACDEHG FRAIKTKGGH GDLATDAAMI
EGLRTLLGPD IALMLDFNQS LDPAEATRRI TRLANYDLTW IEEPVPQENL SGHAQVRERS
DIPIQAGENW WFPRGFAEAI AAGASDFIMP DLMKVGGITG WLNVAGQADA ASIPMSSHIL
PEASAHVLAV TPTAHFLEVL DVAGAILAEP LQVIDGKVTA RGPGLGLAWN EPAVAKYQVQ