Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4577 |
Symbol | |
ID | 5155967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 4797744 |
End bp | 4798826 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640559378 |
Product | putative mandelate racemase/muconate lactonizing family protein |
Protein accession | YP_001240512 |
Protein GI | 148255927 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.145361 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCATTG CCGCCATCAC CGGCGTCACC GCGCGAGCCG TGATCACGCC GATGAAGCGT CCGCTGCGCA ACGCCTTCGG CGTCATCGAC ACCGGCCCCC TGGTGCTGAT CGACGTCGCG ACCGATCAGG GGGTTACGGG CCACTCTTAT CTGTTTGCCT ACACCAGGCT CGCGCTGAAG CCGCTGGTGC TCTTGGTCGA GGAGATCGGC CGCGAGCTCA CCGGCAAGGC GCTGGTCCCG ATCGATCTGA TGAAGCTCAT GGACGCAAAA TTCCGGCTGC TCGGCTGGCA GGGGCTGGTC GGCATGGCGG TGTCCGGTCT CGACATGGCG TTCTGGGATG CGCTGGGTCA GATCGCCGGC AAGCCGGTGG TCGAGCTGCT TGGCGGCGCT GCGCGGCCGA TTCCCGCCTA TGACAGCTAT GGCGTGCTCG ACGCCAAAGC CGACGCGCGC ACCCTGCGCA CGGCCTGCGA CGAGCACGGC TTCCGCGCCA TCAAGACCAA AGGCGGCCAT GGCGACCTCG CCACCGACGC GGCGATGATC GAGGGCCTGC GCACGTTGCT CGGCCCCGAC ATCGCGCTGA TGCTCGACTT CAACCAGTCG CTGGATCCCG CGGAAGCGAC GCGCAGAATC ACGCGCCTTG CGAATTACGA TTTGACCTGG ATCGAGGAGC CGGTGCCGCA GGAAAACCTG TCCGGTCACG CCCAGGTGCG CGAGCGCTCG GACATTCCGA TCCAGGCCGG TGAGAACTGG TGGTTTCCGC GCGGCTTCGC CGAGGCGATC GCGGCCGGCG CCTCCGACTT CATCATGCCC GATCTGATGA AGGTCGGCGG CATCACCGGC TGGCTCAATG TCGCAGGCCA GGCCGACGCG GCCTCGATCC CGATGTCCAG CCACATCCTG CCCGAGGCCA GCGCGCATGT GCTGGCGGTG ACGCCGACGG CGCACTTCCT GGAGGTGCTC GACGTCGCCG GCGCCATCCT CGCCGAGCCG CTGCAGGTGA TCGACGGCAA GGTAACCGCG CGAGGGCCCG GATTGGGGCT CGCCTGGAAC GAGCCCGCGG TCGCGAAATA TCAGGTGCAG TGA
|
Protein sequence | MTIAAITGVT ARAVITPMKR PLRNAFGVID TGPLVLIDVA TDQGVTGHSY LFAYTRLALK PLVLLVEEIG RELTGKALVP IDLMKLMDAK FRLLGWQGLV GMAVSGLDMA FWDALGQIAG KPVVELLGGA ARPIPAYDSY GVLDAKADAR TLRTACDEHG FRAIKTKGGH GDLATDAAMI EGLRTLLGPD IALMLDFNQS LDPAEATRRI TRLANYDLTW IEEPVPQENL SGHAQVRERS DIPIQAGENW WFPRGFAEAI AAGASDFIMP DLMKVGGITG WLNVAGQADA ASIPMSSHIL PEASAHVLAV TPTAHFLEVL DVAGAILAEP LQVIDGKVTA RGPGLGLAWN EPAVAKYQVQ
|
| |