| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4560 |
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| Symbol | nuoD |
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| ID | 5153371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4779967 |
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| End bp | 4781163 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640559360 |
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| Product | NADH dehydrogenase subunit D |
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| Protein accession | YP_001240497 |
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| Protein GI | 148255912 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
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| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.17714 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAGC AGAGCCCGGC ACTCCGCAAC TTCACGATCA ATTTCGGTCC GCAGCATCCG
GCGGCGCACG GCGTGCTGCG TCTCGTGCTG GAGCTGGACG GCGAGGTGGT CGAACGGGTC
GATCCGCATA TCGGCTTGCT GCATCGCGGC ACCGAGAAGC TGATCGAGAC CAAGACCTAT
CTGCAGGCGA TGCCCTATTT CGACCGGCTC GACTATGTCG CGCCGATGAA CCAGGAGCAT
GCGTTCTGCC TTGCGGCCGA GCGGCTGCTC GGCATCGAGG TGCCGCGCCG CGGCCAGCTG
ATCCGCGTGC TGTATTCGGA GATCGGGCGG CTGCTCTCGC ATCTGCTCAA CGTCACCACG
CAGGCGATGG ACGTCGGCGC GCTGACCCCG CCGCTGTGGG GCTTCGAGGA GCGCGAGAAG
CTGATGGTGT TCTATGAGCG CGCCTCCGGT TCGCGCATGC ACGCCAACTA CTTCCGCATC
GGCGGCGTCC ACCAGGACCT GCCGCCGAAG CTGATCGACG ACATCGACGC GTTCTGCGAT
CCGTTCCTGA AGGTGGTCGA CGATCTCGAC CAGTTGCTCA CCGGCAACCG CATCTTCAAG
CAGCGCAATG TCGACATCGG CGTCGTCACC CTGAAGCAGG CCTGGGAGTG GGGCTTCTCC
GGCGTGATGG TGCGCGGCTC GGGCGCGGCC TGGGACCTGC GCAAGTCGCA GCCTTATGAT
GTCTACGCCG AGATGGAGTT CGACGTTCCC ATTGGCAAGA ATGGCGACTG CTACGACCGC
TATCTGATCC GCATGGAAGA GATGCGCCAG TCGGTGCGCA TCATGAAGCA GTGCATCCAG
AAGCTGCGGG CGCCGGACGG GCAGGGGCCG GTCGTGGTCA CCGACAACAA GATCGCGCCG
CCGCGCCGTG GCGAGATGAA GCGCTCGATG GAAGCGCTGA TCCACCACTT CAAGCTCTAT
ACCGAGGGCG TGCACGTCCC GGCAGGCGAG ATCTATGCCG CCGTGGAGGC CCCGAAGGGC
GAGTTCGGCG TCTACCTGGT CTCCGACGGC TCCAACAAGC CGTACAAGTG CAAGATCCGG
GCGCCGGGCT TCGCCCATCT GCAGGCGATG GACTTCCTGT GCCGCGGGCA TCTGCTCGCC
GACGTCTCGG CCATTCTCGG CTCGCTCGAC ATCGTGTTCG GAGAGGTGGA CCGCTGA
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| Protein sequence | MNEQSPALRN FTINFGPQHP AAHGVLRLVL ELDGEVVERV DPHIGLLHRG TEKLIETKTY
LQAMPYFDRL DYVAPMNQEH AFCLAAERLL GIEVPRRGQL IRVLYSEIGR LLSHLLNVTT
QAMDVGALTP PLWGFEEREK LMVFYERASG SRMHANYFRI GGVHQDLPPK LIDDIDAFCD
PFLKVVDDLD QLLTGNRIFK QRNVDIGVVT LKQAWEWGFS GVMVRGSGAA WDLRKSQPYD
VYAEMEFDVP IGKNGDCYDR YLIRMEEMRQ SVRIMKQCIQ KLRAPDGQGP VVVTDNKIAP
PRRGEMKRSM EALIHHFKLY TEGVHVPAGE IYAAVEAPKG EFGVYLVSDG SNKPYKCKIR
APGFAHLQAM DFLCRGHLLA DVSAILGSLD IVFGEVDR
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