| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4554 |
|---|
| Symbol | nuoH |
|---|
| ID | 5150313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 4773572 |
|---|
| End bp | 4774642 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640559354 |
|---|
| Product | NADH dehydrogenase subunit H |
|---|
| Protein accession | YP_001240491 |
|---|
| Protein GI | 148255906 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.212256 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATT TCTTTGCGAG CTCATTCTGG ACCGGCTTCC TCTGGCCGCT GATCGTCATG
ATCGCGCAGA GCGTGCTGCT CCTCGTCGTC CTCCTGGTCG CGATCGCCTA TATCCTGCTG
GCGGACCGCA AGATCTGGGC CGCGGTGCAG ATCCGCCGGG GACCCAACGT GGTCGGGCCC
TGGGGCCTGT TCCAGTCGTT CGCCGACCTC CTGAAGTTCG TGCTCAAGGA GCCGATCATC
CCGGCGGGCG CCAACAAGGG CGTCTTCCTG CTGGCGCCGC TGGTGTCCTG CGTGCTGGCG
CTGGCGGCCT GGGCGGTGAT TCCGACCAAT CTCGGCTGGG CGATCGCCGA CATCAATGTC
GGCATCCTCT TCATCTTCGC GATCTCGTCG CTGTCGATCT ACGGCATCAT CATGGCCGGC
TGGTCGTCGA ACTCGAAATA TCCGTTCCTG GCGGCGCTGC GCTCGGCGGC GCAGATGGTG
TCCTACGAAG TCTCGATCGG CTTCGTCATC ATCACCGTGC TGCTCTGTGC CGGCACCTTG
AACCTCTCGG CGGTCGTCGA GGCGCAGCAT GCCCGCGGTC TCGCCAGCCT GATCGGCCTG
CCGCAACTGA CGATCCTGAA CTGGTACGTC TGGCCGCTGT TCCCGATGTT CGTGGTGTTC
TACGTCTCGG CGCTGGCCGA GACCAACCGT CCGCCGTTCG ATCTCGTGGA GGCGGAATCC
GAGCTCGTGG CCGGCTTCAT GGTGGAATAC GGCTCGACGC CCTATCTGCT GTTCATGCTC
GGCGAATATG TCGCCATCAC CACGATGTGC GCGCTGGCGA CGATCCTGTT CCTCGGCGGC
TGGCTGCCGC CGATCGACCT GCCGCCGTTC AACTGGGTGC CCGGCGTCAT CTGGTTCGCA
CTCAAGCTGT TCTTCATGTT CTTCCTGATC GCGATGGCGA AAGCGATCGT GCCGCGCTAC
CGCTACGACC AGTTGATGCG ACTCGGTTGG AAAGTGTTCC TGCCGCTGTC GCTGGTCATG
GTGGTGATCG TCGCGGGCGT GCTGCACTTC GCCGGCATCG CGCCGAAATG A
|
|---|
| Protein sequence | MADFFASSFW TGFLWPLIVM IAQSVLLLVV LLVAIAYILL ADRKIWAAVQ IRRGPNVVGP
WGLFQSFADL LKFVLKEPII PAGANKGVFL LAPLVSCVLA LAAWAVIPTN LGWAIADINV
GILFIFAISS LSIYGIIMAG WSSNSKYPFL AALRSAAQMV SYEVSIGFVI ITVLLCAGTL
NLSAVVEAQH ARGLASLIGL PQLTILNWYV WPLFPMFVVF YVSALAETNR PPFDLVEAES
ELVAGFMVEY GSTPYLLFML GEYVAITTMC ALATILFLGG WLPPIDLPPF NWVPGVIWFA
LKLFFMFFLI AMAKAIVPRY RYDQLMRLGW KVFLPLSLVM VVIVAGVLHF AGIAPK
|
|---|
| |