Gene BBta_4549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4549 
SymbolnuoM 
ID5151583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4768465 
End bp4769973 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content64% 
IMG OID640559349 
ProductNADH dehydrogenase subunit M 
Protein accessionYP_001240486 
Protein GI148255901 
COG category[C] Energy production and conversion 
COG ID[COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) 
TIGRFAM ID[TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.899725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.177769 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCT GGCCAATTCT CTCCGTCGTC ACCTTCCTGC CGATCGTCGG CGCGCTGCTG 
ATCTATCTGG TGCGCGGCGA CGACGAGGCC GCAAGGCGCA ATGCGCGCTG GATCGCGCTG
TGGACCACGC TGATCACCTT CGCGGTGTCG GTGCTCCTGG TGCTGCGCTT CGATCCCAAC
CAGACCGACT TCCAGTTCGT CGAGAAATCG AACTGGCTGG CGGCCGGCAT CAGCTATCAC
ATGGGCGTCG ACGGCATCTC GCTGCCGTTC GTGATCCTGA CCACCGCCTT GATGCCGTTC
TGCATCGTGG CGAGCTGGAA GTCGGTCACC AACCGCCTGC GCGAATACAT GATGGCGTTC
CTGATCCTGG AAACGCTCAT GGTCGGCACC TTCTCGGCGC TCGACCTCGT GCTGTTCTAT
CTGTTCTTCG AGGGCGGTCT GATCCCGATG TTCCTGATCA TCGGCGTCTG GGGCGGTCCG
CGCCGGGTCT ACGCGTCCTT CAAGTTCTTC CTCTACACGC TGCTCGGCTC GGTGCTGATG
CTGCTGGCCA TCATGGCGCT GTATTGGAAC GCCGGCACGA CCGACATTCC GACCCTGATG
CATACGGCGG TGCCGCGGTC GTTGCAGACC TGGGCCTGGC TGGCCTTCTT CGCCTCCTTC
GCGGTGAAGA TGCCGATGTG GCCGGTTCAC ACCTGGCTGC CGGACGCCCA CGTCGAGGCG
CCGACGGCCG GCTCGGTGAT CCTGGCCGCG ATCCTCTTGA AGATGGGCGG CTACGGCTTC
CTGCGCTTCT CGCTGCCGAT GTTCCCGCTG GCGTCGCACG ATTTCGCGCC GCTGGTGTGG
ACGCTCTCGG CGATCGCGAT CATCTACACC TCGCTGGTCG CGCTGATGCA GGAGGATATC
AAGAAGCTGA TCGCCTACTC GTCGGTGGCG CATATGGGCT TCGTGACCAT GGGCATCTTC
GCCGGCACCA TGCAGGGCGT CGCCGGCGGC GTGTTCCAGA TGATCTCGCA CGGCATCGTC
TCGGGGGCGC TGTTCCTCTG CGTCGGCGTG GTCTACGACC GCATGCACAC CCGCGAGATC
GCGGCCTATG GCGGCCTCGT CAACCGGATG CCGATCTACG CGCTGGTGTT CATGGTGTTC
ACCATGGCCA ATGTCGGTCT GCCCGGCACC TCCGGCTTCG TCGGCGAGTT CATGACCCTG
CTCGGCACCT TCAAGGTGTC GATCCCGACC GCCTTCTTCG CGACCTTCGG CGTGATCCTG
TCGGCGGGCT ACGCGCTGTG GCTGTATCGC AAGGTGGTGT TCGGTGCGCT GACCAAGCCG
TCGCTCGCCA GCATCAAGGA CCTCACCTTG CGCGAGGGCG TGATCCTGTT TCCGCTGGTG
GCGCTGACCA TCCTGTTCGG CGTGTATCCG AAGCCGATCC TCGACATGTC GGCGGCCTCG
GTGCAGCAGC TCGTCAACAA CTACAATACC GCCGTGACGG CCGTGAAGGC CGCCGCGCTG
CTCCAATGA
 
Protein sequence
MTTWPILSVV TFLPIVGALL IYLVRGDDEA ARRNARWIAL WTTLITFAVS VLLVLRFDPN 
QTDFQFVEKS NWLAAGISYH MGVDGISLPF VILTTALMPF CIVASWKSVT NRLREYMMAF
LILETLMVGT FSALDLVLFY LFFEGGLIPM FLIIGVWGGP RRVYASFKFF LYTLLGSVLM
LLAIMALYWN AGTTDIPTLM HTAVPRSLQT WAWLAFFASF AVKMPMWPVH TWLPDAHVEA
PTAGSVILAA ILLKMGGYGF LRFSLPMFPL ASHDFAPLVW TLSAIAIIYT SLVALMQEDI
KKLIAYSSVA HMGFVTMGIF AGTMQGVAGG VFQMISHGIV SGALFLCVGV VYDRMHTREI
AAYGGLVNRM PIYALVFMVF TMANVGLPGT SGFVGEFMTL LGTFKVSIPT AFFATFGVIL
SAGYALWLYR KVVFGALTKP SLASIKDLTL REGVILFPLV ALTILFGVYP KPILDMSAAS
VQQLVNNYNT AVTAVKAAAL LQ