| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4513 |
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| Symbol | ispU |
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| ID | 5154551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4728005 |
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| End bp | 4728760 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640559314 |
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| Product | undecaprenyl pyrophosphate synthase |
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| Protein accession | YP_001240451 |
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| Protein GI | 148255866 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.260319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.537254 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAATG CCGCGGCCCC CATGACGGCG CCGGATCGAT CCGACGGTCC GGCCCATGTT
GCCATCATCA TGGATGGCAA TGGCCGCTGG GCTGCGGCGC GCGGACTGCC GCGGGCGGAG
GGTCATCGCC GCGGCGTCGA GGCGCTGCGC CGGGTCGTGC GCGCCTCGCA CGAGCTCGGT
ATTCGCTATC TCACCATCTT TTCGTTCTCG TCCGAGAACT GGTCGCGGCC GGCGAGCGAG
ATCGGCGATC TGTTCGGCCT GCTGCGCCGC TTCATCCGCA ATGACCTCGC CACGCTGCAT
CGCGATGGCG TGCGGGTCAG GGTGATTGGC GAGCGCGATG GCCTCGAGCC TGACATCTGC
GCGCTGTTGA GCGAGGCTGA AGAGCTAACC CGCGGCAACA CCAAGCTCAC GCTGGTGGTC
GCCTTCAATT ACGGTTCCCG CCAGGAGATC GCGCGCGCGG CGCAGCGGCT GGCGCGCGAG
GTCGCCGAGG GACGGCGCGA TCCGGCCTCG ATCGATGCCG ACGCGATCGG CGCCCACCTC
GATGCGCCCG ATATTCCCGA TCCTGACCTC ATCATCCGCA CCAGCGGCGA GCAGCGGCTG
TCGAACTTCC TGATGTGGCA GGCCGCCTAT AGCGAGCTCG TGTTCGTTCC CATGCACTGG
CCCGATTTCG ACAAGGCCGC GCTCGAAGGC GCGATCGCCG AGTTCGGCCG GCGCGAACGC
CGCTTCGGCG GCCTCGTGGC GAAAACAGCC TCGTGA
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| Protein sequence | MTNAAAPMTA PDRSDGPAHV AIIMDGNGRW AAARGLPRAE GHRRGVEALR RVVRASHELG
IRYLTIFSFS SENWSRPASE IGDLFGLLRR FIRNDLATLH RDGVRVRVIG ERDGLEPDIC
ALLSEAEELT RGNTKLTLVV AFNYGSRQEI ARAAQRLARE VAEGRRDPAS IDADAIGAHL
DAPDIPDPDL IIRTSGEQRL SNFLMWQAAY SELVFVPMHW PDFDKAALEG AIAEFGRRER
RFGGLVAKTA S
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