| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4509 |
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| Symbol | |
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| ID | 5154543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4721955 |
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| End bp | 4724513 |
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| Gene Length | 2559 bp |
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| Protein Length | 852 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640559310 |
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| Product | surface antigen domain-containing protein |
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| Protein accession | YP_001240447 |
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| Protein GI | 148255862 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.263137 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.782892 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCG GATTGCGGGT GCGGGGGGGC ATGCTGGCCA CCCTAATCAT GTTCGCCGTT
CCGGTGGCTC TGCCGCTGGC GAATGTGATG ATGTCGTCGC CAGCCGCCGC ACAGTCGGTC
AATGCGATCG AAGTTGTCGG CAACCGTCGC GTCGAGGTGG AGACCATCCG CTCGTATTTC
AAGCCGGGTC CGGGCGGCAC GCTTGATGCC GGCCGCGTTG ACGACGGCCT CAAGGCCCTG
ATCGAGACCG GCTTGTTCTC GGATGTGAAG ATCAACCGCC AGGGCGGACG CCTGGTCGTG
ACCGTGGTGG AAAACCCGGT GATCGGCCGC GTCGCCTTCG AGGGCAACAA GAAGGTCAAG
GACGAGCAGC TCCAGGCCGA GGTCCAGTCG AAGCCGCGCG GCACCCTGTC GCGGCCGATG
GTTCAGTCGG ATGCGCAGCG CATCGCCGAG ATCTATCGCC GGTCTGGCCG TTACGACGTG
CGCGTCACGC CGGAAATGAT CGAGCAGCCG AACAACCGCG TCGACCTGAT CTTCACGGTC
GAGGAAGGCG CCAAGACCGG CGTGAAGTCG ATCGAGTTCG TCGGCAACAA CGCGTTCTCG
TCCTACCGTC TGAAGGACGT CATCAAGACG CACGAGACCA ATCTTTTAAG CTTCCTCGGC
TCCGGCGACG TGTACGATCC GGACCGTGTC GAGGCCGACC GCGATCTCAT CCGCCGCTTT
TACCTCAAGA ACGGCTACGC CGACGTGCAG GTCGTCGCCG CGCTCACCGA ATATGATCCG
GAGCGCAAGG GCTTCCTGGT CACCTTCAAG ATCGAGGAAG GCCAGCAATA TCGGGTCGGT
TCGGTCGACT TCCAGTCGAC GATCCCGACG CTCGACCCCA ATTCGCTGCG CACGTTCTCG
CGGGTGAATG TCGGCTCGCT CTACAACGTC GAAAGCCTCG AAAAGTCGGT CGAAGAGATG
CAGATCGAGG CCTCGCGGCG CGGCTATGCC TTCGCCGTGG TGCGGCCGCG TGGCGACCGT
AATTTCGAGG CCCACACCGT CTCGGTGGTG TTCGCCATCG ACGAGGGCCC GCGCACCTAT
ATCGAGCGCA TCAATATCCG CGGCAACACC CGCACCCGCG ATTACGTCAT TCGTCGCGAG
TTCGATATCT CCGAGGGCGA CGCCTATAAC CGTGCGCTGG TCGATCGGGC CGAGCGCCGC
CTGAAGAATC TCGACTTCTT CAAGGACGTG AAGATCACGA CCGAGCCGGG CTCCTCGAGC
GACCGCGTCA TCCTGGTCGT CAATCTCGAA GAGAAATCGA CCGGTGACTT CTCGATCTCC
GGCGGCTATT CGACCACCGA TGGCGCGCTG GCCGAGGTGT CGATCTCGGA GCGCAACTTC
CTGGGCCGCG GTCTGTTCGC CAAGGCCTCC GTCACCTACG GTCAGTTCGC CCGTGGCTAC
TCGCTGTCCT TTGTCGAGCC CTATCTGCTC GACTACCGGG TGGCGCTCGG CCTCGACCTC
TATCAGCGTC AGCAGCTGGC CAACAACTTC ATCTCGTACG GCACCAAGAC GCTCGGCTTC
AGCCCGCGGC TCGGCTTCCA GCTGCGCGAG GATCTGTCGC TGCAGCTGCG CTACTCGATC
TACCGCCAGG AGATCACGCT GCCGGCGACG CTGTCGGACT GTAACAACCT GACCGCCGGT
ACCCTGATCG GCAACCGCTT CGTGCCGTTC AACCCGACGC CTGCGTTTAT CAATGCCAAT
GGCGGCGTCG ATCCGACCGG CAATAACGGC CTGGGCTGCT TCGCCAACGG CGAGGCGTCG
CTGCCGGTCC GCCAGGAGCT GGCGAAGGGC GCGACCCTGA CTTCGGCGCT GGGCTACACG
CTCAACTACA ACACGCTGGA CAACAACAAG AACCCGACCG ACGGCCTGCT CATCGACTTC
AAGCAGGACT TCGCGGGTGT TGGCGGCGAC GTGTCGTACC TGAAGACCGC GTTCGATGCG
AAGTACTTCA CCCCGCTGGT GTCGGACATC GTCAGCATCG TCCATCTGCA GGGCGGTATC
CTGAACAAGA TCGGCAACAC GCAGCTGCGC ATGCTCGATC ACTTCCAGAT GGGCCCGAAT
CTGGTCCGCG GCTTCGCCCC GAACGGCATC GGTCCGCGTG ACATCAACCC GTTCGGCACG
CAGGACGCGC TGGGCGGCAC CAAGTACTGG GGTGCTTCGC TCGAACTGCA GATGCCGTTC
TGGTTCCTGC CCAAGGAAGT GGGTCTGAAG GGTGCGGTCT ATGCCGACGC CGGCGGGCTC
TGGGGCTATC AGGGACCGAC GTCGTGGGCC CAGACCGGCG AGGTCAATGT GGCCGGCTGT
CGGGCACCGA CGCGAGCCAC GGGAACCGTG CCTGCCAATG CCGGCACCTG CCTCGGACTG
CAGTTCGACG ACCAGAACAA GGTCCGCAGC TCGGTCGGTG TGGGTCTGGT GTGGGCGTCG
CCGTTCGGAC CGCTGCGCTT CGACTACGCG ATCCCGCTCA CCAAGGGGCA GTTCGACCGG
ACCCAGGAAT TCCGCTTCGG TGGTGGCACG TCGTTCTAA
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| Protein sequence | MKFGLRVRGG MLATLIMFAV PVALPLANVM MSSPAAAQSV NAIEVVGNRR VEVETIRSYF
KPGPGGTLDA GRVDDGLKAL IETGLFSDVK INRQGGRLVV TVVENPVIGR VAFEGNKKVK
DEQLQAEVQS KPRGTLSRPM VQSDAQRIAE IYRRSGRYDV RVTPEMIEQP NNRVDLIFTV
EEGAKTGVKS IEFVGNNAFS SYRLKDVIKT HETNLLSFLG SGDVYDPDRV EADRDLIRRF
YLKNGYADVQ VVAALTEYDP ERKGFLVTFK IEEGQQYRVG SVDFQSTIPT LDPNSLRTFS
RVNVGSLYNV ESLEKSVEEM QIEASRRGYA FAVVRPRGDR NFEAHTVSVV FAIDEGPRTY
IERINIRGNT RTRDYVIRRE FDISEGDAYN RALVDRAERR LKNLDFFKDV KITTEPGSSS
DRVILVVNLE EKSTGDFSIS GGYSTTDGAL AEVSISERNF LGRGLFAKAS VTYGQFARGY
SLSFVEPYLL DYRVALGLDL YQRQQLANNF ISYGTKTLGF SPRLGFQLRE DLSLQLRYSI
YRQEITLPAT LSDCNNLTAG TLIGNRFVPF NPTPAFINAN GGVDPTGNNG LGCFANGEAS
LPVRQELAKG ATLTSALGYT LNYNTLDNNK NPTDGLLIDF KQDFAGVGGD VSYLKTAFDA
KYFTPLVSDI VSIVHLQGGI LNKIGNTQLR MLDHFQMGPN LVRGFAPNGI GPRDINPFGT
QDALGGTKYW GASLELQMPF WFLPKEVGLK GAVYADAGGL WGYQGPTSWA QTGEVNVAGC
RAPTRATGTV PANAGTCLGL QFDDQNKVRS SVGVGLVWAS PFGPLRFDYA IPLTKGQFDR
TQEFRFGGGT SF
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