| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4508 |
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| Symbol | lpxD |
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| ID | 5154542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4720769 |
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| End bp | 4721836 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640559309 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| Protein accession | YP_001240446 |
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| Protein GI | 148255861 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.374205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.956551 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCAGC CGAGCTTTTT TCAATCTCCA CCTCCCACGA CCCTCGCGGC GATCGCTGCG
GCGGCCAATG CCACGCTGGT CGATGCCTCC CGGGGCGAGC AGGTGATCAC GGGACTGGCG
GCGCTCGATG AGGCCGGTCC GATGCATCTC GCCTTTTTCG ACAATCTCAA ATACGCCGAC
CAGTTGGCGA TGACGAAAGC GGGCGCCTGT CTGGTCAGCC CACGCTTCGA GGCGCGGGTG
CCGTCCCATG TCGCCGTCGT CAGGGCCAAT CAGCCGTTCC GGGCCTTCGT GCAACTCGCG
CGCACGATGC ACGCCGACGC GCTGCGTCCT CAATCCTGGT TCGGGTGCGA CGGGATTTCG
TCACAAGCGA TCATCGATCC CAGCGCGCGC CTGGAGGACG GCGTCGTCGT CGAGCCGCTG
GCCGTGATCG GCGCTCATGT CGAGATCGGG GCGGGGACCA TCGTCGGCGC CGGAGCGGTG
ATCGGCCCGC ACGTCAAGAT CGGGCGCGAC TGCAATGTCG GCGCTCGCAC CGTCATCCAA
TGCGCGCTGA TCGGCAATGA CGTGCTGATC CATCCGGCCT GCGCGATCGG CCAGGACGGC
TATGGCTTCA TCTTCTTCGG CCCAGGTGGC CATGTGAAAG TGCCGCAGAC GGGGCGGGTG
ATCATCCAGA ATCATGTCGA AATCGGTGCC GGCACGACGA TCGATCGCGG CAGTCTGCGC
GACACAGTGA TCGGCGAGGG CACCAAAATC GACAATCAGG TCCAGATCGG CCACAATGTC
ACGATCGGGC GGCATTGCCT CCTGGCAGCC CAGATCGGGC TGGCGGGGAG CCTCACGATC
GGCGACAACG TCGCGCTTGG GGCAAAGGTC GGCATCAACA ACCACCTGAC GATCGGTGAC
GGGGCGCAGG TGACCGCGAT GAGCGGCGTC AAGGACGACA TCCCGCCGAA TGGCCGGTGG
GGCGGGTTCT TCGCCAAGCC GACCAAACAG TGGTTCCGCG AGATCGTCGC GGTGGAACGG
CTGGTGCGCG ATCAGACGGC GACGAACAAG GACGAAGGAC AGGAGTGA
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| Protein sequence | MAQPSFFQSP PPTTLAAIAA AANATLVDAS RGEQVITGLA ALDEAGPMHL AFFDNLKYAD
QLAMTKAGAC LVSPRFEARV PSHVAVVRAN QPFRAFVQLA RTMHADALRP QSWFGCDGIS
SQAIIDPSAR LEDGVVVEPL AVIGAHVEIG AGTIVGAGAV IGPHVKIGRD CNVGARTVIQ
CALIGNDVLI HPACAIGQDG YGFIFFGPGG HVKVPQTGRV IIQNHVEIGA GTTIDRGSLR
DTVIGEGTKI DNQVQIGHNV TIGRHCLLAA QIGLAGSLTI GDNVALGAKV GINNHLTIGD
GAQVTAMSGV KDDIPPNGRW GGFFAKPTKQ WFREIVAVER LVRDQTATNK DEGQE
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