Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4487 |
Symbol | ctpA |
ID | 5155124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 4699808 |
End bp | 4701142 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640559291 |
Product | carboxy-terminal-processing protease precursor (C- terminal-processing protease) |
Protein accession | YP_001240428 |
Protein GI | 148255843 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.372365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGAAGA ACTGGCTGTT CCTGGCGGGC ACGCTGACCG GTGTCGGACT GACCTTGCTG GTCAGCGGAC CCGACGGTGC GCAACTGATC GCACGGGCCA AGGCCGCGGC CGGCATGGCC GACACCTATT CGCAGCTCAA CCTGTTCGGC GCGGTGTTCG AGCGCGTTCG TGCCGACTAC GTCGAAAAGC CCGATGATCC CGCCCTCATC GAGGGGGCGA TCAATGGCAT GGTGTCATCG CTCGATCCGC ATTCGCGCTA CATGAACGAC AAGTCCTGGC GCGACATGCA GGAAACGACA TCCGGTGAGT TCGGCGGCCT CGGTATCGAG GTCACGATGG AGGATGGGCT CGTCAAGGTG GTCGCTCCGA TCGACGATAC GCCGGCCTCG AAGGCTGGCA TTCTCTCGGG TGACCTGATT GCCAAGATCG ATGGCGAAGC GGTCCAGGGG CTGACGCTCG AACAGGCCGT TGCCAAGATG AAGGGCGGCG TCAACACCAA GACCAAGCTC ACCATCATGC GCAAGGGCAA GGACGCGCCG CTCGACGTGA CGCTGACGCG GGAGATCATC CGTGTCCGCC CGGTGCGTTA TCACACCGAG GGCGGCGATA TCGGCTATAT CCGCATCACC TCGTTCAACG AGCAGACCAC CGAGAGCCTG CGCAAGGCGA TCACCAGCAT CTCGAAGGAC ATTCCGCAGG ACAAGCTCGC CGGCTATGTC GTCGACCTGC GCAACAATCC GGGCGGCCTG CTCGACCAGG CGGTGTCGGT GTCCAGCACG TTCCTGCCGC GTGGCGAAGT GGTGTCGACG CGCGGGCGCA ATCCGGAAGA GACGCAGCGC TTCACGGCGC GCGGCGGCGA TCTCACCAAG GGCAAGCCGC TGGTGGTTCT GATCAACGGC GGATCGGCCT CGGCCTCGGA GATCGTCGCG GGCGCGCTGC ATGATCACAA GCGCGCGACG CTGGTGGGCA CGCGGTCATT CGGCAAGGGC TCGGTGCAGA CGATCATTCC GCTCGGGGCC GGCAACGGCG CGCTCGCCCT GACCACCGCG CGCTATTACA CGCCGTCGGG CCGCTCGATC CAGGCGCAGG GCATCGCGCC CGACATCGAG GTCAAGCAGG ACGTGCCGGA TGATCTGAAG GATCGCACCG ACATCAAGGG CGAAGCGTCG ATGCGCGGGC ATCTCTCGGC GGCCGACGGC ACCGAGCAGA CAGGTTCGCA ATCCTACGTT CCGCCGGATG AGAAGGACGA CAAGGCGCTG CACGCGGCCT TCAACGTGCT GCGCGGCGTC ACAGTGAATG CCGACGTTCG CGCCAAGGCA GCGGTGCCGA ATTGA
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Protein sequence | MRKNWLFLAG TLTGVGLTLL VSGPDGAQLI ARAKAAAGMA DTYSQLNLFG AVFERVRADY VEKPDDPALI EGAINGMVSS LDPHSRYMND KSWRDMQETT SGEFGGLGIE VTMEDGLVKV VAPIDDTPAS KAGILSGDLI AKIDGEAVQG LTLEQAVAKM KGGVNTKTKL TIMRKGKDAP LDVTLTREII RVRPVRYHTE GGDIGYIRIT SFNEQTTESL RKAITSISKD IPQDKLAGYV VDLRNNPGGL LDQAVSVSST FLPRGEVVST RGRNPEETQR FTARGGDLTK GKPLVVLING GSASASEIVA GALHDHKRAT LVGTRSFGKG SVQTIIPLGA GNGALALTTA RYYTPSGRSI QAQGIAPDIE VKQDVPDDLK DRTDIKGEAS MRGHLSAADG TEQTGSQSYV PPDEKDDKAL HAAFNVLRGV TVNADVRAKA AVPN
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