| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4480 |
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| Symbol | tpiA |
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| ID | 5155235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4691418 |
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| End bp | 4692173 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640559285 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_001240422 |
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| Protein GI | 148255837 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.135113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGACC ACATCCGGCC GCTGATCGCC GGCAACTGGA AAATGAACGG CCTGAAGGCC
TCCACCGCCG AGTTCGAGGC GATGCTGGCG GGCGCCGCCG AAGTCACCGG CAAGGCCGAT
CTCCTGGTGT GTCCGCCGGC AACCTTGCTG GCCGGCTTTG CCGACAAAGC GCGTGGCACG
AGGGCTGTGG CCGTCGGCGC GCAGGATTGC CACGCCAAGG CATCGGGGGC CCATACCGGC
GACCTTTCAG CCGAGATGCT GGCTGATGCC GGCGCCAGTG CGATCATCGT CGGCCACTCC
GAACGTCGCG CCGATCATGG TGAGAGCGAT GTTGTGGTGC ACCAGAAGAC GGAAGCCGTC
TGGCGCGCCG GCCTGGTTGC GATCGTCTGC GTCGGCGAGA CCCAGCAGCA GCGCGACGCC
GGTCAGACCC TGGACATCCT GCGCGGCCAG CTGAACCTCA GCCTGCCGCA AGGCTCCACG
GCGGCCAATC TGACCGTGGC CTATGAGCCG GTTTGGGCGA TCGGCACCGG CCTGACCCCG
ACCGCAAAGG ATGTCGAGCA AATCCATGCA TTTATCAGGA CGCTGCTGAT CGAGCGCTTC
AACGGCGAGG GGGCGCGGAT GCGCATCCTC TATGGCGGTT CGGTGAAGCC GTCCAATGCG
GCCGAGCTGA TGGCGGTCGC GAATGTGAAT GGCGCCCTGG TCGGCGGCGC CAGCCTCAAG
GCGGCGGATT TTCTCGCAAT TGCGAAAGGA TGTTGA
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| Protein sequence | MTDHIRPLIA GNWKMNGLKA STAEFEAMLA GAAEVTGKAD LLVCPPATLL AGFADKARGT
RAVAVGAQDC HAKASGAHTG DLSAEMLADA GASAIIVGHS ERRADHGESD VVVHQKTEAV
WRAGLVAIVC VGETQQQRDA GQTLDILRGQ LNLSLPQGST AANLTVAYEP VWAIGTGLTP
TAKDVEQIHA FIRTLLIERF NGEGARMRIL YGGSVKPSNA AELMAVANVN GALVGGASLK
AADFLAIAKG C
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