| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4474 |
|---|
| Symbol | kdsA |
|---|
| ID | 5155571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 4686376 |
|---|
| End bp | 4687236 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640559279 |
|---|
| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
|---|
| Protein accession | YP_001240416 |
|---|
| Protein GI | 148255831 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAG CCGCCACTGC CGCTGCCATC GTGACCGCAG GCTCGGTGCG CTTCGGCAAC
GACCTGCCGC TCGCCGTCAT TGCGGGGCCC TGTCAGCTCG AGAGCCGCGG CCACGCGCTC
GAGGTCGCCT CGGCGCTGAA GGAGATCGCG ACGCGGCTGA ATATCGGCCT CGTGTACAAG
ACCTCGTTCG ACAAGGCCAA CCGCACCAGC GGCTCCGCCG CGCGCGGGCT TGGCCTTGCG
CAGTCGCTGC CGATCTTCGC CGAGATCCGG TCGTCCCTCG GTCTTCCGGT GCTGACCGAC
ATTCACGACG CAAGCCAATG TGCCGAAGTG GCGCAGGCCG TCGACGTCCT GCAGATCCCG
GCGTTCCTGT GCCGGCAGAC CGACCTGCTG CTCGCGGCGG CTGCGACCGG CAAGGTCGTC
AACGTCAAGA AGGGCCAGTT TCTGGCGCCG TGGGACATGG CGAACGTCGT GGCCAAGATC
ACCGGCGCCG GCAATCCCAA CGTGCTCGCG ACCGAGCGCG GCGTCTCGTT CGGCTACAAC
ACGCTGATCT CGGACATGCG CTCGCTGCCG ATCATGGCGC GCACGACCGG CGCCCCCGTC
ATCTTCGATG CCACGCATTC GGTGCAGCAG CCGGGCGGGC AGGGGACGTC CTCGGGCGGC
CAGCGCGAAT TCGTGCCGGT GCTGGCGCGC GCCGCAGTCG CCGTCGGTGT GGCCGGCGTC
TTCATCGAGA CCCATCCCGA TCCGGATCAT GCGCCCTCTG ACGGGCCGAA CATGGTGCCG
CTGGCGGAAT TCGAAGGTCT GCTGCGCAGG TTGATGGCGT TCGATAAGCT GGCCAAGGCA
CCGGCGACCG ACACGCGCTG A
|
|---|
| Protein sequence | MTTAATAAAI VTAGSVRFGN DLPLAVIAGP CQLESRGHAL EVASALKEIA TRLNIGLVYK
TSFDKANRTS GSAARGLGLA QSLPIFAEIR SSLGLPVLTD IHDASQCAEV AQAVDVLQIP
AFLCRQTDLL LAAAATGKVV NVKKGQFLAP WDMANVVAKI TGAGNPNVLA TERGVSFGYN
TLISDMRSLP IMARTTGAPV IFDATHSVQQ PGGQGTSSGG QREFVPVLAR AAVAVGVAGV
FIETHPDPDH APSDGPNMVP LAEFEGLLRR LMAFDKLAKA PATDTR
|
|---|
| |