| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4468 |
|---|
| Symbol | |
|---|
| ID | 5154364 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 4679529 |
|---|
| End bp | 4680698 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640559273 |
|---|
| Product | putative Beta-lactamase family protein |
|---|
| Protein accession | YP_001240410 |
|---|
| Protein GI | 148255825 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.279361 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACCG ACCTTTCTCC CTCCCGCGCC GATCTCTCCA ACTGGCGCAC CGCGCCGTTC
AGCCGTTGGG CCTTTCACAA CATCCGATCG ATCCTGCCGG TCGCCGAGAT CGAGAGCGCG
CCGGGCAGCG CCTGGTCCCT GCCGGCACGT CCGGTCGCGT TCGATGATTT CAGCCTGCGC
CTGCCCAAGG GTGGCACGCT CGACCTCGAT GGCTTCCTGA AGACGACGGC GACCGACGGA
CTGTTGATCC TGCAGGACGG CCACATCGTG TTCGAACACT ATGACGGCGG CACCGATCGC
GACACGCCGC ACATTCTGAT GTCCGCGACC AAGTCGATCA CCGGCTTGAT GCTCGGCATC
CTTGAGGATC GCGGCGAGAT CGACATCGAT GCCGAGGTGG CGCGCTACGT GCCGGAGGTC
GCGGCCACGG CCTACCAGGG CGCCACGATC CGTGAGCTCA TCGACATGCG CGCCGGCATC
GTGTTCGACG GCGCCGGGCT GCAGGCCTAT GCCGACGCCG CCGGCTGGGA GCCGGTCGCA
CCGGGCACAA CGCCGAACCT GCATGACTTC TTCGCGACGA TGCGCGCGCA GGCCAAGCCG
CATGGCGGTG CTTTCAGCTA CGTCTCGTCC AACACCGATC TGCTCGGCTG GGCGATCGAG
CGCGCCACCG GCCGCAGTTT CGCCAGCCTC GTAAGCACCC TGCTGTGGAA GCCGATGGGC
GCGAGCGGCG AGGCCTTCAT CACGCTCGAT CGCAAGGGCG CGCCGCGCTG CACCGGCGGC
TTCTGCGCCA CCTTGCGGGA TTTCGCCCGG CTCGGCCAAC TCGTGCTGTC GGCCGGCCGG
CGCGGCTCGC ATGCGATCAT CCCCGAGACC TGGCTCGACG ACATCAGGAC CAACGGAGAC
GCGCAGGCCT GGCGCGACGG CCAATGGCGC GACAGCTTCG CAGCCATCAG CCGCAACATG
CATTATCGCA GCGGGTGGTA CGTCATCAAC GATCAGCCAC AGCTGACATT CGCGATGGGC
ATTCACGGCC AGAACCTGTT CGTCGATGCT GCGAACGCAA TCGTGATCGC AAAGCTGTCG
TCCTGGCCGC AGCCGGTCGA GGGGCCATCG ATCTGGCTCA CACACCAGGC GGTGGCCGAA
TTCACCCGCT GCATCATGGC CGCACGGTGA
|
|---|
| Protein sequence | MSTDLSPSRA DLSNWRTAPF SRWAFHNIRS ILPVAEIESA PGSAWSLPAR PVAFDDFSLR
LPKGGTLDLD GFLKTTATDG LLILQDGHIV FEHYDGGTDR DTPHILMSAT KSITGLMLGI
LEDRGEIDID AEVARYVPEV AATAYQGATI RELIDMRAGI VFDGAGLQAY ADAAGWEPVA
PGTTPNLHDF FATMRAQAKP HGGAFSYVSS NTDLLGWAIE RATGRSFASL VSTLLWKPMG
ASGEAFITLD RKGAPRCTGG FCATLRDFAR LGQLVLSAGR RGSHAIIPET WLDDIRTNGD
AQAWRDGQWR DSFAAISRNM HYRSGWYVIN DQPQLTFAMG IHGQNLFVDA ANAIVIAKLS
SWPQPVEGPS IWLTHQAVAE FTRCIMAAR
|
|---|
| |