| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4463 |
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| Symbol | pdhA |
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| ID | 5155214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4674228 |
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| End bp | 4675250 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640559268 |
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| Product | pyruvate dehydrogenase E1 component, alpha subunit |
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| Protein accession | YP_001240405 |
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| Protein GI | 148255820 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | [TIGR03182] pyruvate dehydrogenase E1 component, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.481905 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCAC CCAAGAAAAC CGCCACAAAG GAACAAGGGC AGGACAGAGA CAACGGCCCG
CCGCCGGAAT TCACCAGAGA ACAGGAATTG GCCGCGCTGC GCGACATGCT GCTGATCCGT
CGCTTTGAGG AGAAGGCGGG TCAGCTTTAT GGCATGGGTG CGATCGGCGG CTTCTGCCAC
CTCTATATCG GCCAGGAGGC TGTGGTGGTC GGCATGCAGA TGGCGCTGAA GGAGGGTGAC
CAGGTCATCA CCGGTTATCG CGACCACGGC CACATGCTGG CCTGCGGCAT GGATGCCAAG
GGCGTCATGG CCGAGCTCAC CGGGCGCCGT GGCGGCTACT CCAAGGGCAA GGGCGGCTCC
ATGCACATGT TCAGCATGGA GAAGAACTTC TTCGGCGGCC ATGGCATCGT CGGCGCCCAG
GTGTCGCTCG GCACGGGGCT GGCGCTCGCC AACCGCTACC GCGGCAACGA CTCGGTCAGC
GTCGCTTATT TCGGCGACGG CGCGGCCAAT CAGGGCCAGG TCTATGAGAG CTTCAACATG
GCGGAGCTCT GGAAGCTGCC GGTGATCTAC GTCATCGAGA ACAACCGCTA TGCCATGGGC
ACCGCGGTGT CGCGCGCCTC GGCGCAGACC GACTTCTCCA AGCGCGGCAT CTCCTTCAAC
ATCCCGGGCG AGCAGGTCGA CGGCATGGAC GTGCGCGCCG TGAAGGCTGC CGGCGAGAAG
GCGGTCGCCT GGTGCCGCGA GGGCAAGGGC CCCTACATTC TGGAAATGCA GACCTACCGC
TATCGCGGCC ACTCGATGTC GGACCCGGCC AAGTACCGCA CCCGCGAGGA GGTCGAGAAG
GTCCGTCACG ACCAGGATCC GATCGAGCAG GTCCGCAACC GCCTGCTGGC GGCCAAGGTC
AGCGAGCAGG ATCTCAAGGC GATCGATGCC GATGTGCGCA AGATCGTCAA CGAGGCGGCC
GATTTCGCCC AGGCCGATCC CGAGCCTGAT GCCGCCGAGC TTTACACCGA CGTTTACCGC
TAA
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| Protein sequence | MAAPKKTATK EQGQDRDNGP PPEFTREQEL AALRDMLLIR RFEEKAGQLY GMGAIGGFCH
LYIGQEAVVV GMQMALKEGD QVITGYRDHG HMLACGMDAK GVMAELTGRR GGYSKGKGGS
MHMFSMEKNF FGGHGIVGAQ VSLGTGLALA NRYRGNDSVS VAYFGDGAAN QGQVYESFNM
AELWKLPVIY VIENNRYAMG TAVSRASAQT DFSKRGISFN IPGEQVDGMD VRAVKAAGEK
AVAWCREGKG PYILEMQTYR YRGHSMSDPA KYRTREEVEK VRHDQDPIEQ VRNRLLAAKV
SEQDLKAIDA DVRKIVNEAA DFAQADPEPD AAELYTDVYR
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