| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4462 |
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| Symbol | pdhB |
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| ID | 5155213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4672801 |
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| End bp | 4674180 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640559267 |
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| Product | pyruvate dehydrogenase subunit beta |
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| Protein accession | YP_001240404 |
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| Protein GI | 148255819 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
[COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.150502 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCGC TGTCGCCCAC GATGGAGAAG GGCAACCTCG CCAAATGGCT GAAGAAGGAA
GGCGAGGCGA TCAAGTCGGG TGACGTGATC GCCGAGATCG AGACCGACAA GGCGACGATG
GAAGTCGAGG CGACCGATGA GGGCACGCTC GGCAAGATCC TGATTCCCGA AGGCACCGCC
GACGTCGCCG TCAACACGCC GATCGCGACC ATCCTCGCCG ACGGCGAGAC CGCGGCCGAT
CTCGGTAAGG TGGCCGCGCC TGCTGCCGAG ATGAAGGCCG CGCAATCGGC GCCGCCGGCC
GAGCCGGCCG CGTCCGTGCA GGCCTCGCCC GCGCCGACCG GCGTGGCTGC GCCGCACAGC
GTGGCCGAGC CGGATCCGGA AGTGCCCGCC GGCACCGAGA TGGTCACGCA GACCATCCGC
GAGGCGCTGC GCGACGCCAT GGCCGAGGAG ATGCGCCGCG ACGGCGACGT CTTCATCATG
GGCGAGGAGG TCGCCGAATA TCAGGGCGCC TACAAGGTCA CCCAGGGTCT GCTGCAGGAG
TTCGGCGCCC GCCGCGTGAT GGACACGCCG ATCACCGAGC ATGGCTTCGC CGGCATCGGC
GTCGGTGCGG CGATGGCCGG CCTGAAGCCG ATCGTCGAGT TCATGACCTT CAACTTCGCC
ATGCAGGCGA TCGACCAGAT CATCAACTCC GCGGCCAAGA CGCTGTACAT GTCCGGCGGC
CAGATGGGCT GCTCGATCGT GTTCCGCGGT CCGAACGGCG CGGCTGCCCG CGTCGCCGCG
CAGCACAGCC AGGACTACTC GTCCTGGTAC TCGCACATCC CCGGCCTCAA GGTGGTCGCG
CCGTATTCCG CGGCCGACGC CAAGGGCCTC TTGAAGGCTG CGATCCGTGA TCCGAACCCG
GTGATCTTCC TCGAGAACGA GGTGCTTTAC GGTCACTCCG GCGAGGTGCC GAAGCTCGAC
GACTACGTGA TCCCGATCGG CAAGGCGCGC ATCGCGCGGA GCGGCAAGGA CGTCACCATC
ATCTCCTGGT CGAACGGCAT GACCTACGCG CTGAAGGCCG CCGACGAGCT CGCCAAGGAG
GGCATCGAGG CCGAGGTGAT CGACCTGCGC ACCCTGCGTC CGATGGACAC TGACACCATC
ATCGCCTCGG TCAAGAAGAC GGGACGTGCG GTTACGGTGG AAGAGGGCTG GGCGCAGAGC
GGCGTCGGCG CCGAGATCGC CGCGCGCATC ATGGAGCACG CCTTCGACTA TCTCGATGCG
CCCGTGACGC GCGTGTCCGG CAAGGACGTG CCGATGCCGT ATGCGGCGAA CCTCGAGAAG
CTCGCGCTGC CCTCGGCTGC GGAGGTCGTG CAGGCCGCCA AATCCGTCTG CTACCGCTAA
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| Protein sequence | MPALSPTMEK GNLAKWLKKE GEAIKSGDVI AEIETDKATM EVEATDEGTL GKILIPEGTA
DVAVNTPIAT ILADGETAAD LGKVAAPAAE MKAAQSAPPA EPAASVQASP APTGVAAPHS
VAEPDPEVPA GTEMVTQTIR EALRDAMAEE MRRDGDVFIM GEEVAEYQGA YKVTQGLLQE
FGARRVMDTP ITEHGFAGIG VGAAMAGLKP IVEFMTFNFA MQAIDQIINS AAKTLYMSGG
QMGCSIVFRG PNGAAARVAA QHSQDYSSWY SHIPGLKVVA PYSAADAKGL LKAAIRDPNP
VIFLENEVLY GHSGEVPKLD DYVIPIGKAR IARSGKDVTI ISWSNGMTYA LKAADELAKE
GIEAEVIDLR TLRPMDTDTI IASVKKTGRA VTVEEGWAQS GVGAEIAARI MEHAFDYLDA
PVTRVSGKDV PMPYAANLEK LALPSAAEVV QAAKSVCYR
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