| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4460 |
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| Symbol | pdhC |
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| ID | 5155489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4671120 |
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| End bp | 4672478 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640559265 |
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| Product | branched-chain alpha-keto acid dehydrogenase subunit E2 |
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| Protein accession | YP_001240402 |
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| Protein GI | 148255817 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01349] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.301937 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATCA ATATTCTGAT GCCCGCGCTG TCGCCGACGA TGGAGAAGGG CAACCTCGCT
CGTTGGCTCA AGAAGGAAGG CGACCAGGTC AAGTCGGGCG AGGTCATCGC CGAGATCGAG
ACCGACAAGG CCACGATGGA GGTCGAGGCG GTCGACGAAG GCACGCTCGC CAAGATCCTG
GTGCCAGAAG GCACGCAGGA CGTGCCGGTC AACGACGTGA TCGCGGTGCT CGCCGGCGAA
GGCGAGGACG TCAAGGCGGC CGGCAGCGCT CCGGCGGCCG CGGCGCCCAA GGCTGAGACC
AAGGCCGCTG CGGCGGCTCC CGCGGCCGCG GCTGCTCCGG CCGCCGCGCC TGCGCCAAAG
CCGGCTGCTG CTCCGGCTGT GCCCGCGCCG GCCGCTGCCG CTGCTCCGCA GTTGAACGGC
CACGCCCGCG TGTTCTCGTC GCCGCTGGCG CGGCGTCTCG CCAAGGACGC CGGCATCGAT
CTCGCGCGTA TCACCGGCAC CGGCCCGCAT GGCCGCGTCG TGGCGCGTGA CGTCGAGGAA
GCGAAGTCCG GCAAGGGCCT CAAGGCCGCG CCGTCGGCGG CGCCCGCCGC TGCGGGCGCA
CCCGCGCTGG CGCCGTCGAT GTCCGACAAG CAGATCCTGG CGCTGTTCGA GCCGGGCTCC
TACGAAGTCA TCCCGCATGA CGGCATGCGC CGCACCATTG CGCAGCGCCT GACCGCCTCG
GTGCAGAACG TTCCGCACTT CTATCTCACG ATCGACTGCG ACATCGGCAA GCTGCTCACC
GCGCGCGAGG AGATCAATGC GGCAGCTCCA AAGGACAAGG AGAAGAAGCC GCTCTACAAG
CTCTCGGTGA ACGACTTCGT CATCAAGGCG ATGGCGGTGG CGCTGCAGAA GATTCCGAAC
TGCAACGTCA GCTGGACCGA AGGCGGCATG GTCAAGCACA AGCATTCCGA CGTCGGCGTC
GCCGTCGCGA TGCCGGGCGG CCTGATCACC CCGATCATTC GCAAGGCCGA GACCAAGACG
CTGTCGGCGA TCTCAGGTGA GATGAAGGAC TTCGCCGCGC GCGCCCGCTC GCGCAAGCTG
AAGCCGGAGG AGTATCAGGG CGGCACCACC GCGGTGTCCA ACCTCGGCAT GTACGGCATC
AATCACTTCA CCGCCGTGAT CAATCCGCCG CATGCGACCA TCCTCGCGGT CGGCACGTCG
GAAGAGCGGC CGGTGGTACG CAACGGCAAG ATCGAGATCG CGAACATGAT GAGCGTGACC
CTGTCCTGCG ATCACCGCGC GATCGACGGC GCGCTCGGCG CCGAGCTGAT CGGCGCCTTC
AAGCAGCTGA TCGAAAATCC CGTGATGATG ATGGTGTGA
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| Protein sequence | MPINILMPAL SPTMEKGNLA RWLKKEGDQV KSGEVIAEIE TDKATMEVEA VDEGTLAKIL
VPEGTQDVPV NDVIAVLAGE GEDVKAAGSA PAAAAPKAET KAAAAAPAAA AAPAAAPAPK
PAAAPAVPAP AAAAAPQLNG HARVFSSPLA RRLAKDAGID LARITGTGPH GRVVARDVEE
AKSGKGLKAA PSAAPAAAGA PALAPSMSDK QILALFEPGS YEVIPHDGMR RTIAQRLTAS
VQNVPHFYLT IDCDIGKLLT AREEINAAAP KDKEKKPLYK LSVNDFVIKA MAVALQKIPN
CNVSWTEGGM VKHKHSDVGV AVAMPGGLIT PIIRKAETKT LSAISGEMKD FAARARSRKL
KPEEYQGGTT AVSNLGMYGI NHFTAVINPP HATILAVGTS EERPVVRNGK IEIANMMSVT
LSCDHRAIDG ALGAELIGAF KQLIENPVMM MV
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