| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4459 |
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| Symbol | lpD |
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| ID | 5155488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4669547 |
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| End bp | 4670968 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640559264 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_001240401 |
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| Protein GI | 148255816 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.250901 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACA CATCCTTCGA CGTCATCATC ATTGGCTCCG GCCCGGGCGG CTACGTCACC
GCGATCCGCG CCGCCCAGCT CGGCTTCAAG ACCGCGATCA TCGAGAAGTC CTATCTCGGC
GGCATCTGCC TGAACTGGGG CTGCATCCCG ACCAAGGCGT TGCTGCGCTC GGCCGAGATC
TATCACTACA TGCAGCACGC CAAGGATTAC GGCCTCTCTG CCGAGAAGAT CTCCTACGAT
CCGAAGGCTG TCGTGGCCCG CTCGCGCGGC GTGTCGAAGC GGCTGAACGA TGGCGTCGGC
TTCCTGATGA AGAAGAACAA GGTCCAGGTG ATCTGGGGCA AGGCTGCCAT CGACGCGCCC
GGCAAGATCA CGGTGACCAA ATCCGACGTC GAGTCGCCCA AGGGCGCGCT GGGCGAGGGC
ACCTATCAGG CCAAGCACAT CATTGTCGCG ACCGGTGCGC GGCCGCGCGT GCTGCCGGGC
CTCGAGCCGG ACAAGAAGCT GGTGTGGACC TATTTCGAGG CGATGGTGCC GGAGAAGATG
CCGAAGTCGC TGCTGGTGGT CGGCTCCGGC GCGATCGGCA TCGAGTTCGC CTCGTTCTTC
CGCACCATGG GCTCCGAGGT GACGGTGGTC GAGGTGCTGC CGCAGATCCT GCCAGTGGAG
GACGCCGAGA TCGCCGGCAT CGCCCGCAAG CAGCTGGAGA AGCAGGGCCT CAAGATCATG
ACCGGCGCCA AGGTCACTAA GCTCGACAAG AAGACCGACA GCGTGGTCGC CACGATCGAC
GACGGCAAGG GCAAGATCGA GGCGGTCGAA TTCGAGCGCG TGATCTCGGC CGTCGGCGTG
GTCGGCAACA TCGAAAATCT CGGGCTGGAG AAGCTCGGGG TGAAGACCGA TCGCGGCTGC
ATCGTCATCG ACGGCTACGG CAAGACCAAC GTGCCCGGCA TCTACGCCAT CGGTGACGTT
GCCGGTCCCC CGATGCTGGC GCACAAGGCC GAGCATGAGG GCGTGGTCTG CATCGAGGCG
ATCAAGGGCC TGCATCCGCA CGCGATGGAC AAGAACCTCA TTCCGGGCTG CACCTACTGC
CATCCGCAGA TCGCCTCCGT CGGCCTCACC GAGGCCAAGG CCAAGGAGCA GGGCCGCGAC
ATCCGTGTCG GCCGCTTCCC CTTCGTTGGC AACGGCAAGG CGATCGCGCT CGGCGAGGAC
CAGGGCCTGG TCAAGGTGAT CTTCGACAAG AAGACGGGAC AGCTGATCGG CGCGCATATG
GTCGGCGCCG AGGTGACCGA GCTGATCCAG GGCTATGTCG TCGCGATGAA CCTGGAGACG
ACGGAGGAGG AGCTGATGCA CACGGTGTTC CCGCATCCGA CCCTGTCGGA GATGATGAAG
GAAGCCGTGC TCGACGCCTA TGGCCGCGTG CTTAACATGT AG
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| Protein sequence | MADTSFDVII IGSGPGGYVT AIRAAQLGFK TAIIEKSYLG GICLNWGCIP TKALLRSAEI
YHYMQHAKDY GLSAEKISYD PKAVVARSRG VSKRLNDGVG FLMKKNKVQV IWGKAAIDAP
GKITVTKSDV ESPKGALGEG TYQAKHIIVA TGARPRVLPG LEPDKKLVWT YFEAMVPEKM
PKSLLVVGSG AIGIEFASFF RTMGSEVTVV EVLPQILPVE DAEIAGIARK QLEKQGLKIM
TGAKVTKLDK KTDSVVATID DGKGKIEAVE FERVISAVGV VGNIENLGLE KLGVKTDRGC
IVIDGYGKTN VPGIYAIGDV AGPPMLAHKA EHEGVVCIEA IKGLHPHAMD KNLIPGCTYC
HPQIASVGLT EAKAKEQGRD IRVGRFPFVG NGKAIALGED QGLVKVIFDK KTGQLIGAHM
VGAEVTELIQ GYVVAMNLET TEEELMHTVF PHPTLSEMMK EAVLDAYGRV LNM
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