Gene BBta_4458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4458 
Symbol 
ID5155487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4668171 
End bp4669412 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content64% 
IMG OID640559263 
Productthreonine synthase 
Protein accessionYP_001240400 
Protein GI148255815 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0649612 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.176073 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATCCA GCGACAATCT CACCACCGAG CGTCCGACCT TCGTCACCCA TCTCGAATGC 
GCGATGGAGG GCGATCATTA TCCGGCCGAC CAGGTCCACA ACCTCTCCAA GGCTGGCAAG
CCGCTGCTGG TGCGCTACGA TCTCGCGGGC GTGAAGCAGG CGCTGACCAA GGATGCGCTG
GCGCAGCGGC CCGCCGACAT GTGGCGCTAT CGCGAGCTGC TGCCGGTGCG CAAATGCCAG
GATATCGTCA GCCTCGGTGA GGTGATGACG CCGCTGATCA ATCTGCCCAA GCTGTCGAAG
AAGCTCGGCG GCGGTGAGAT CATCGTCAAG GATGAGGGCC GGCTGCCGAC CGGGTCGTTC
AAGGCGCGCG GCCTCGTCAT GGCGGTGTCG ATGGGCAAGG CACTCGGCAT CACCCATATG
GCGATGCCGA CCAACGGCAA TGCCGGCGCC GCGCTGGCGG CCTACGCGAC CTCCTGCGGC
ATCAAGACGA CGATCTTCTG TCCGGCGGAT ACGCCGGAGG TGAACGTCAG CGAGATCGAG
CTGCAGGGCG CGACGGTCTA TCGCGTCAAC GGGCTGATCG ACGATTGCGG CAAGATCGTC
GGCGAGGGCA AGGCCAAGGT CGGCTGGTTC GACACGTCGA CCTTGAAGGA GCCGTATCGC
ATCGAGGGAA AGAAGACGAT GGGGCTGGAG CTCGCCGAGC AGCTCGGCTG GGATGTGCCC
GACGTGATCT TCTATCCGAC CGGCGGCGGC ACCGGCCTGA TCGGCATGTG GAAGGCATTC
GACGAGCTCG AAAAGATCGG GTTCATCGGT TCGAAGCGCC CGCGCATGGT CGCGGTGCAG
GCGTCCGGCT GCGCGCCGAT GGTGCGCGCT TACGAAGCTG GCGTCGAGCA TGCGACGCGC
TGGGAGGACG CCCACACCAT CGCCTCCGGC ATTCGCGTGC CGCAGGCCGT GGGGGATTTT
CTCATTTTGC GCGCCGTTCG CGAGAGCAAG GGTTTCGCGA TCGCGGTCGA CGACGACAAG
ATTTCATCTG CGCTGTCGGA GGTCGCGCGC GAGGAGGGGC TGTTGCTGTG CCCCGAGGGC
GCTGCGACCT ACGCCGCCTA CAAGCAGAGC CTCGCCGACG GGCGCGTGAC GAAAAACGAT
CGCGTCATGC TGTTCAATTG CGCGACAGGA CTTAAATATC CGCTGCCGCC GGTCACCCGT
ACGCTCGATC GTCACCAGCC GATCGATTTC GGGCAGTTCT AA
 
Protein sequence
MKSSDNLTTE RPTFVTHLEC AMEGDHYPAD QVHNLSKAGK PLLVRYDLAG VKQALTKDAL 
AQRPADMWRY RELLPVRKCQ DIVSLGEVMT PLINLPKLSK KLGGGEIIVK DEGRLPTGSF
KARGLVMAVS MGKALGITHM AMPTNGNAGA ALAAYATSCG IKTTIFCPAD TPEVNVSEIE
LQGATVYRVN GLIDDCGKIV GEGKAKVGWF DTSTLKEPYR IEGKKTMGLE LAEQLGWDVP
DVIFYPTGGG TGLIGMWKAF DELEKIGFIG SKRPRMVAVQ ASGCAPMVRA YEAGVEHATR
WEDAHTIASG IRVPQAVGDF LILRAVRESK GFAIAVDDDK ISSALSEVAR EEGLLLCPEG
AATYAAYKQS LADGRVTKND RVMLFNCATG LKYPLPPVTR TLDRHQPIDF GQF