| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4447 |
|---|
| Symbol | |
|---|
| ID | 5153830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 4656187 |
|---|
| End bp | 4657701 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640559252 |
|---|
| Product | amidase |
|---|
| Protein accession | YP_001240389 |
|---|
| Protein GI | 148255804 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.234112 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.54166 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATCA AACGCCCGAA TGCCGAGGAA GTCGCCGATC TCGCCGCCAG CCTGCACATG
AACATGACGG TCGAGGAGGC CGCCGAATAT CTGTCGCTGA TGGGCGGCAT GTTCGACCAG
TACGACATCA TCGATGAGTT GCCGAACCCG CTGCCGCCGG TGAAATATCC GCGCACGCCG
GGCGCCAAGC CGCCGGCCAA GGAGAACAAG TACAACGCCT GGGCGATCAA GACCGAGGTC
AAGGGCGCGT CAAGCGGCAA GCTCGCCGGC CGCACCGTCG TGCTGAAGGA CAACGTCGCG
CTCGCGGGCG TGCCGATGAT GAACGGCTCG ACCACGCTCG AAGGCTTTAT TCCCGCCGCC
GACGCCACCA TCGTGTCCCG CATCCTCGAT GCCGGTGGCA CCATCGTCGG CAAGGCCGTG
TGCGAGCATT TCTGCCTGTC CGGCGGCAGC CACACCTCCG ATCCCGCGCC GGTGCACAAT
CCCTGGAAGA TGGGCTATTC AGCCGGCGGC TCGTCCTCGG GCAGCGCCGC GCTGGTAGCG
GCCGGTGAGG TCGACATGTC CATCGGCGGT GACCAGGGCG GCTCGATCCG TATCCCCGCG
TCCTATTGCG GCATCTATGG CATGAAGGCG ACTCACGGCC TCGTGCCCTA CACCGGCGTG
ATGCCGATCG AGTCGACGAT CGACCACACC GGACCGATGA CGGCCAACGT CAAGGACAAC
GCGCTGCTGC TCGAAGTGCT GGCCGGCGCC GACGGCCTCG ATCCCAGGCA ATATGCGCCG
AAGGTCTCGG CCTACACCGA GGCGCTCGGC AAGGGCGTCA AGGGCCTCAA GATCGGCGTG
CTCAAGGAAG GCTTCAGCGC GCCGAACATG GAAGAGGGCG TGGTGTCCAA GGTCAAGGCC
GGCGCGGAGC GCTTCGCCAA GCTGGGCGCC TCGGTGTCCG AGGTCTCGAT CCCCGAGCAC
ATGCATGCGC TGGCGGCGTG GAACCCGATC ACGCTCGAAG GCTTCCTGGT GCAGATGATG
CTCGGCAACG GCATGGGCTT CAACTGGAAG GGCCTCTACG ACGTCGGTCT GCTCGACGCG
CATTCCGGCT GGCGCACCCG CGCCGACGAC CTGTCGGTGA CGCTGAAGCT GACCATGCTG
GTCGGGCAGT GGGGCCTCGA GCACTATCGC GGCCGCTACT ACGCCAAGTC GCGCAACATC
GCGATCCAGG CCAAGGCCGC CTATGACGCC ATGTTCGGCT CCTACGACCT CCTGCTGATG
CCGACCCTGC CGTGCGTCGC CACGCCGATC CCGGCCAAGG ACGCACCGCT CGCCGAAGTC
GTGCAGCGCG CCTTCGAGAT GACCGCCACG ACGAGCCCGT TCGACGTGAC AGGTCATCCG
GCGATGACCC TGCCATGCGG ACTCTCCGAC GGTCTCCCCG TCGGCCTGAT GCTGATCGGC
AAGGACTACG CCGAATCCAC CATCTACCAG GCGGCGGCGG CGTTCGAGGC CGACGGCGAC
TGGAAGACGT TCTGA
|
|---|
| Protein sequence | MSIKRPNAEE VADLAASLHM NMTVEEAAEY LSLMGGMFDQ YDIIDELPNP LPPVKYPRTP
GAKPPAKENK YNAWAIKTEV KGASSGKLAG RTVVLKDNVA LAGVPMMNGS TTLEGFIPAA
DATIVSRILD AGGTIVGKAV CEHFCLSGGS HTSDPAPVHN PWKMGYSAGG SSSGSAALVA
AGEVDMSIGG DQGGSIRIPA SYCGIYGMKA THGLVPYTGV MPIESTIDHT GPMTANVKDN
ALLLEVLAGA DGLDPRQYAP KVSAYTEALG KGVKGLKIGV LKEGFSAPNM EEGVVSKVKA
GAERFAKLGA SVSEVSIPEH MHALAAWNPI TLEGFLVQMM LGNGMGFNWK GLYDVGLLDA
HSGWRTRADD LSVTLKLTML VGQWGLEHYR GRYYAKSRNI AIQAKAAYDA MFGSYDLLLM
PTLPCVATPI PAKDAPLAEV VQRAFEMTAT TSPFDVTGHP AMTLPCGLSD GLPVGLMLIG
KDYAESTIYQ AAAAFEADGD WKTF
|
|---|
| |