Gene BBta_4440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4440 
Symbol 
ID5154383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4650580 
End bp4651440 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content72% 
IMG OID640559245 
Productputative urease accessory protein ureD 
Protein accessionYP_001240382 
Protein GI148255797 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0829] Urease accessory protein UreH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.71549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCTT CAGCCCCGGA GCCGCCACGG CTCGATCTCT CGTTTGTCCG GCGCGGCGGC 
CGCACTGTGA TCGACCGGCG GCTGTTCGCC TGGCCGTTTG TGCTGACGCG CAGCTTCCAC
ACGGATGGTG CGCGGCCGGA CCTGCTCAGC GTCATCCTGC AGACCGGCAG CGGCGCCGTG
CATGGCGAGG ACCGGCTGAC GCAACGCTTC ACGCTGAGAG AAGGAGCAGC CGTCTCTGTC
ACGACGCAGG GCGCGACCTC GGTGCATCGC GCCGAGCCGG GCGCGCGCGC CGTCGAGCAG
GTGCAGCTGC GCGTCGCGGC CGGCGCGTCG CTCGACTACC GGCCGGAGCC GCGCATCCTG
TTTCCCGACG CGGCGTTGTG CCAGGTGCTG GAGCTCGACT GCGCCGCCGA TGCTGTCGCG
CTCGTCACCG ACGCATTCAC GATGCATGAT CCGGACGGGC AGGGGCGGCT GTTTCGCGAG
CTCGACTCGA CCGTCATTGT GCGCCGGCCA AGCCAGGAGC CGCTGCTGAT CGACCGCATG
CAGCTGTGCG ATCCCGGGAC CGCGCTGTTC AAGGGCCGCC GCGCGTTCGG CTCGGCGGTG
TTGATGCTGC CCGACATGCA CGATCGCGCC GCGATCCGCC TGCGTGTCAT CGACACGCTC
GCGCACATCG ATGACCTCTA TGCTGCCGCG AGCCTGCTGC CGCAGAGTGT CGGCATCGGC
ATTCGCCTTG CAGCCCGCGA GCTGCGCCAG CTGCGGGCCG GCTTCGACGC GGTCGCGGCG
CTGGTGCGCG AGATCGATCT CGGTGCGCGC GCCGCTCAGG CGCCGAGCGC CGCGGCCACG
GCGCGGCCGA CGGCCGCGTG A
 
Protein sequence
MSASAPEPPR LDLSFVRRGG RTVIDRRLFA WPFVLTRSFH TDGARPDLLS VILQTGSGAV 
HGEDRLTQRF TLREGAAVSV TTQGATSVHR AEPGARAVEQ VQLRVAAGAS LDYRPEPRIL
FPDAALCQVL ELDCAADAVA LVTDAFTMHD PDGQGRLFRE LDSTVIVRRP SQEPLLIDRM
QLCDPGTALF KGRRAFGSAV LMLPDMHDRA AIRLRVIDTL AHIDDLYAAA SLLPQSVGIG
IRLAARELRQ LRAGFDAVAA LVREIDLGAR AAQAPSAAAT ARPTAA