Gene BBta_4438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4438 
SymbolxthA2 
ID5154381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4648948 
End bp4649739 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content63% 
IMG OID640559243 
Productexodeoxyribonuclease III 
Protein accessionYP_001240380 
Protein GI148255795 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG CCACCTGGAA CGTCAATTCG GTCCGGCAAC GGATCGAGCA CCTCGTGACC 
TGGCTCAAGG AGTGCTCGCC TGACATCGTC TGCCTGCAGG AGATCAAATG CACGGACGAT
GCGTTCCCGC GGCTGGAGAT CGAGGCGCTG GGCTACAATG TGGTCACCCA CGGCCAGAAG
ACCTTCAACG GCGTCGCCCT GCTGTCGAAG CTGCCATTCG ACGAAACCAG ATCCGGGCTC
GATGGCGATG TCGAGGACGT GCATGCGCGG TTCCTCGAAG GCGTGGTCAG CCTGAAGCAC
GGCGTGGTGC GCATCGCCTG CCTCTATCTG CCCAACGGCA ATCCGCCGAA CACGGAGAAA
TATCCCTACA AGCTCAAATG GATGTCGCGG CTTCGTGACT ATACGCGTGA ACGGCTGAAG
ACCGAGGAGC CGCTGATCCT CGCAGGCGAC TTCAACGTCA TCCCGGCGGC GGCGGATGTC
TCCAATCCCG AGGCCTGGGT CGAGGACGCG CTGTTCCGGC CGGAGACGCG CGAGAGTTTT
CAGGCGCTGC TCGGCTTGGG GCTCACCGAC GCGCTGCGCG CCGTCACCGA TGCGCCGGGG
CAGTACACGT TCTGGGACTA TCAGGCCGGC GCCTGGCAGA AGAATGCAGG GATCCGCATT
GATCACCTGT TGTTGTCCCC ACAGGCCAGC GACCGGCTGG TCGAGGTCGG CATCGACAGC
TACGTCAGGG CCTGGGAGAA GCCGTCCGAT CATGTGCCGG TGTGGGCCGA TTTCGATCTC
GAGACGGCGT GA
 
Protein sequence
MRIATWNVNS VRQRIEHLVT WLKECSPDIV CLQEIKCTDD AFPRLEIEAL GYNVVTHGQK 
TFNGVALLSK LPFDETRSGL DGDVEDVHAR FLEGVVSLKH GVVRIACLYL PNGNPPNTEK
YPYKLKWMSR LRDYTRERLK TEEPLILAGD FNVIPAAADV SNPEAWVEDA LFRPETRESF
QALLGLGLTD ALRAVTDAPG QYTFWDYQAG AWQKNAGIRI DHLLLSPQAS DRLVEVGIDS
YVRAWEKPSD HVPVWADFDL ETA