Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4427 |
Symbol | |
ID | 5153871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 4637809 |
End bp | 4640127 |
Gene Length | 2319 bp |
Protein Length | 772 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640559233 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_001240370 |
Protein GI | 148255785 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0784] FOG: CheY-like receiver |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTGGC CCGGGGACAC ATCCAGCTCC AAGCGCACTG CCGGCGGCAA TCCGCTCAGC GCCTTCTTTC TCTGGATCGG CGGCTTCAGT GCGATCGAAG GGCTCGACGA CGAGTCCCTG ACCGAGCGTG ATCGCCGGCG CATCCGGGCG CGGCAGATCG ACGCCGTAGC GAGCCTTGTC CCGGTGACGA TCGGCATCAA CTTCGCCAAT GCCGCAATCA TTCTCGGGGT GTTCTGGAAC CACATCTCCA ACGCATTTCT GACGGCGTGG GGCCTGTCGA TCGCTGTGGC CGGAGGCCTC GCACTGCGCG GCTGGTGGCG TGCCCGCAAG TCGCGGCCGA AGGAGGCGTC CGAGCGCGGC CTCCGGCGCA TGACATTGCA GGCCTTCTTC CTCGCCGCGG TGTGGGGATC GCTGCCGCTG ATCCTGATGC CGCAGATCGA GCCGGAACTG CAGATCATCG TCGGCTCGCT GATGACAGGC ATGATCTCCG GCGGCGCGTT CGCGATGTCG AGCGTGCCGC GGGCGGGGCT GACCTACACC TGGACGCTGA TGCTGGCGTC CGTCGGCTCG CTGTTGCTGT GTGGCGGCAC GACCTATCTG GTGCTGGTGG TCTTTCTGCT GCTTTACTCC TCCTTCATGG TGCGCCATCT GGTGTCGCAC GGCAATGTGT TCCTGGAAAA CCTGAAGGCC CAGATCCGGC ACGAGCGGCA GAACGAGACG ATCTCGCTGC TGCTCAAGGA ATTCCAGGAG AACGCCGCGA GCTGGCTGTG GCAGACCGAT GCCGAGGGCC GCCTGATCGA TGCGCCGCAG CGCTTCGCCG ACGTGGCCCA GCTGCCGCTC GATCAGCTCA AGGGCGAACG GCTCGTCGAC ACGCTGGAAT ATCTGTGTCC GACCGACACG GCCACCTTGG CGACCTTCGC CGATCGCATG GCGCGGCGGC TGTCGATTCC GGAGATCCTG ATCCATGTCG TGGTCGCCGG CGGCGAACGG CGGCGCTGGG CATTGACCGC GCGGCCGGCG CGCGACTATG AGGGAAAATT CGCAGGCTAT CGCGGCTTCG GCCGCGACGT CACCGAGCGC TGGCGTGCCG AACAGGCCGA GGCCGAGAGC CGGGCGAAAT CCGAATTCCT GGCGATGATG AGCCACGAGA TCCGCACGCC GATGAACGGC GTGCTGGGCC TGGCTTCGAC GCTGTTGGAG ACCAAGCTCG ATCCCGAGCA GCGTCACGCG GTCATGACGA TCCGCGAGTC CGGCGACAAT CTGCAGCGCA TCCTCAACGA CATTCTTGAC CTCTCGAAGC TCAACGCCGG CAAGCTGGAG TTCGAATCGG TCGACTTTTC GCCGGCCGCC CTGGTCGAGG CCGTCACGGC GATCATCGGC GTCAATGCGA AGACCAAGAG CCTGCTGGTC AACGCCGATA TCGACCCGAA ATTGCCGCCG GCGCTGAAGG GCGATGTCGC GCGCATTCGC CAGGTGCTCA TCAATCTCGC CTCCAATGCC GTCAAGTTCA CCGAGCGCGG CGGCCTCACC ATCGCCGTGG CCTGCCGCAC CCGCGACGAT CACAAGGCGA CGATCGAGTG GCGGGTCTCC GACACCGGCA TCGGCATTCC CGCCGACCGC GTCGGCAAGC TGTTCACCGA TTTCGCCCAG GCGGACGCCT CCATCAACCG CCGCTTTGGC GGCACCGGGC TTGGCCTCGC GATCTCCCGC CGCATCATCG AGCAGATGGG CGGCGCCATT GCCGTGTCGT CGGTGCAGGG CGAAGGCTCT ACGTTCCGCT TCAGCCTGAC CTTGCCGTGG AGCGACAAGC AGATCTCCGA TCAGCGCGGC GACCGGGTCG GTGCCGGCGA TCTCAAGGAG CGCATCGAGG CGCTCGGCCG CCCATTGCGC GTCTTGATTG CGGAAGACGA CGCCACCAAC CGCATGGTCG TGTCGAAGAT GTTGCAGGAG TTTGCCGTCG AGAAGTGCAT CGTGCCGGAC GGGCTGCAGG CGGTGAACGC GGCCGGCGAA CAGGAGTTCG ATCTCGTCCT GATGGACGTC CGCATGCCGG AGATGGACGG CATCACCGCC ACCCGGACGA TCCGCGCCAA GGGCGGGCGG CTCGCCGAGC TGCCGATCAT CGCGCTCACC GCCAACGCCT TCCCCGACGA CATCAAGCAG TGCCGCGAGG CTGGGATGTC CGATTTTCTG GCCAAGCCGC TGCGCAAGCC GGCGATGGTC GCGGCGATGC TGAAGGCGCT TGGCCCGGCG GCGCCGACCG TCGCGGCACC GAGCTTGGCG CCGTCCGAGG ACGGCGCCTC GGTGGCGGCG GAGGCCTGA
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Protein sequence | MNWPGDTSSS KRTAGGNPLS AFFLWIGGFS AIEGLDDESL TERDRRRIRA RQIDAVASLV PVTIGINFAN AAIILGVFWN HISNAFLTAW GLSIAVAGGL ALRGWWRARK SRPKEASERG LRRMTLQAFF LAAVWGSLPL ILMPQIEPEL QIIVGSLMTG MISGGAFAMS SVPRAGLTYT WTLMLASVGS LLLCGGTTYL VLVVFLLLYS SFMVRHLVSH GNVFLENLKA QIRHERQNET ISLLLKEFQE NAASWLWQTD AEGRLIDAPQ RFADVAQLPL DQLKGERLVD TLEYLCPTDT ATLATFADRM ARRLSIPEIL IHVVVAGGER RRWALTARPA RDYEGKFAGY RGFGRDVTER WRAEQAEAES RAKSEFLAMM SHEIRTPMNG VLGLASTLLE TKLDPEQRHA VMTIRESGDN LQRILNDILD LSKLNAGKLE FESVDFSPAA LVEAVTAIIG VNAKTKSLLV NADIDPKLPP ALKGDVARIR QVLINLASNA VKFTERGGLT IAVACRTRDD HKATIEWRVS DTGIGIPADR VGKLFTDFAQ ADASINRRFG GTGLGLAISR RIIEQMGGAI AVSSVQGEGS TFRFSLTLPW SDKQISDQRG DRVGAGDLKE RIEALGRPLR VLIAEDDATN RMVVSKMLQE FAVEKCIVPD GLQAVNAAGE QEFDLVLMDV RMPEMDGITA TRTIRAKGGR LAELPIIALT ANAFPDDIKQ CREAGMSDFL AKPLRKPAMV AAMLKALGPA APTVAAPSLA PSEDGASVAA EA
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