| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4421 |
|---|
| Symbol | |
|---|
| ID | 5153794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 4632686 |
|---|
| End bp | 4634275 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640559229 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001240366 |
|---|
| Protein GI | 148255781 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.711547 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATC GTTACCAGGA CAGACCCTTT CCCGCTGATG GTTTTGGCCG CGGTGGAAAC
CAGCCGGCCG ATGCCGATCC GCTCGCCGAG CTCGCTCGCC TGATCGGGCA AAACGATCCT
TTCGCGCAAT CGGGCCGCGC GACGCCCCAG GCTGCTCCAC GCGCCAATGC CAGGCCGGCC
GCGCCGGCTG CCCCCGATCA AGCCGCCGGC ATGCCGCCGG CCGGGCCTCC GACATGGATG
CAGCGCTCGA ACGCTCCGCA ACCGACGGCG GCCAATCCGT TTGCCGACAT GGGACGTGAG
CCGCCGGCTC CGCAGCCCCC GGCCTTCCCG GCTGGCTTCC AGGATCAGCG CGGCCAGGAG
CCCGGTTTTT CCGAGCCGAA TTTTGCTGCC GCGCCGGCCC AGCGGCAGCA GGCCGGTTAT
CCGAACAATG AGTTCGCTGA CCAACTGTCC AAGCTTGATT ACAGCGTCGG CGAGTCGCGC
CATCGCTTCG CCGAGAACGA TCCCGACTAC AATCGCGGTT CGGATTTCGA CGACAACGAT
CAGGATTCAT CGCGCTACGA TGATGCGCTG TTCGGCCAGA TGGGGGCCAA CCAGCAGGGT
TTTCAGGGCG ACAACGAGTT CCAGGATGGC CAATACGGCT ATCAGGACGG CTATGACGAG
GGCGAGGAAG AAGAGAGGCC CCGTCGCCGC AGCGGCATGA GCACGGTCCT GGCAGTGCTG
ACGCTGGCCG TGGTCGGAAC CGGCGGCGCC TACGGCTACA AGACCTATAT CTCGTCCGCC
CGGACCGGCG AGCCGCCGAT CATCCGGGCT GACAATACGC CGACCAAGAT CATGGCGCAG
CAGGATGCGA CGCCGAAAGT GCCCGATCGC CTGCTCGGCA ATGATGGCGG CGAGAAGTTG
GTGTCCCGCG AGGAGACGCC GATGGACGTG AATGCGAATG CGCGCGGAGG CAATCCGCGC
GTCGTGTTCC CGCAGCTCAA CCAGAACGGC GCGCCGCCGG CGGCGTCGAG CGTCGCGCCG
GGTGGCATGC CGTCGCAAAT GGCCAACGCC AATGGGACGC TGCCGAACAG CGATCCGCGT
CCGATCAAGA CGCTGTCGGT GACCGGCGGC AACCAGGCGG CAGCCGATCC GGGCGCTGCG
GCGCCGACGC CGCCCCCGGC CAAGGCCGCG AAGGCTGGCA AGAAATCCGC GGCCAACGCC
AATGCCTCGG CCAATCCGCC GACCGGGGAC AGCCCGATGC CGCTTACGCC GCAGCCGTCG
GCACCCGCGC CGGCGCGGAT CGCCACTGCT GTTCCGGTCA CTGAGCAGGC CCCGTCGAGC
GGCGGCGGCG CTACGGGCGG CTATCTGGTC TCGATCTCGT CGCAGGCCAG CGAGGACGAG
GCCATGCGGG CCTACAAGGC CGCGCAGGAC AAGTACTCAG CCGTGCTCGG CAAATATGAG
CCGATCATCA AGCGCGCGGA TCTGGGTGAA AAGGGCGGTG TCAAGTACCG TGCGGCCGTC
GGCCCCTTCG CGACCAAGGA AGAGGCCAAC AAGATGTGCG GAACGTTGAA AACTGCCGGC
GGACAGTGTT TCCCGTTTAG CAACAATTAA
|
|---|
| Protein sequence | MADRYQDRPF PADGFGRGGN QPADADPLAE LARLIGQNDP FAQSGRATPQ AAPRANARPA
APAAPDQAAG MPPAGPPTWM QRSNAPQPTA ANPFADMGRE PPAPQPPAFP AGFQDQRGQE
PGFSEPNFAA APAQRQQAGY PNNEFADQLS KLDYSVGESR HRFAENDPDY NRGSDFDDND
QDSSRYDDAL FGQMGANQQG FQGDNEFQDG QYGYQDGYDE GEEEERPRRR SGMSTVLAVL
TLAVVGTGGA YGYKTYISSA RTGEPPIIRA DNTPTKIMAQ QDATPKVPDR LLGNDGGEKL
VSREETPMDV NANARGGNPR VVFPQLNQNG APPAASSVAP GGMPSQMANA NGTLPNSDPR
PIKTLSVTGG NQAAADPGAA APTPPPAKAA KAGKKSAANA NASANPPTGD SPMPLTPQPS
APAPARIATA VPVTEQAPSS GGGATGGYLV SISSQASEDE AMRAYKAAQD KYSAVLGKYE
PIIKRADLGE KGGVKYRAAV GPFATKEEAN KMCGTLKTAG GQCFPFSNN
|
|---|
| |