Gene BBta_4418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4418 
Symbol 
ID5153791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4629602 
End bp4630759 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content66% 
IMG OID640559226 
Productcondensin subunit ScpB 
Protein accessionYP_001240363 
Protein GI148255778 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGCT TGGCGGAACT GCGCATGGAA GAGCCCGACG AGATCGTGGC GAGCGAGCCC 
GAGGTGCGCC CCGAAGAGTT GCGCATCCTT GAGGCTCTCC TGTTTGCCTC GGCCGAGCCG
CTCGAGCAGG CGACACTTGC CAAGCGTATG CCTGAAGGTG TCGATATCAA GGCCGCGCTG
GCCCAGCTGC AGGCAGAATA TGCCAATCGC GGCGTCAATC TCGTGCGCGT CGCCAACAAA
TGGACGTTCC GTACCGCCGG CGACCTCGCT TGGCTGATGA CCCGTGAGAG CACCGAGACC
CGCAAGCTGT CGCGGGCGGC CATCGAGGTG CTCGCCATCG TCGCCTATCA CCAGCCGGTG
ACCCGTGCCG AGATCGAAGA GATTCGCGGC GTCGTGACGT CAAAGGGCAC GCTGGACGTT
CTTCTGGAGA CGGGCTGGAT CAAGCCCCGC GGGCGCCGCA AGACCCCCGG CCGGCCGCTG
ACCTTCGGCA CGACGGATGC TTTCCTCGCC CAGTTCAGCC TGGAGACCCT GGGCGATCTG
CCGGGCCTGG AAGAGCTGAA GGGCACGGGC CTGCTGGATT CGCGCCTGCC CACCGGCTTC
ACGGTGCCGA CGCCGTCCGA CGATCCGACC CTGCGCGACG ACGAGGAACC GCTGGATCCG
GGTGATCTCG ATCTGGCGCT GGCGCCGGCT GTCGAGGTCG AGGCCGGAGA GGCCGAAGCT
ACAGAGGCGA CAACGGCAGA GGCGGAAGCG ACTGTCGCCG AGGCTGACGT CAGCGAAACC
GGTTCCATCG ACACTTTGGC CGAGACTCCC GAGGTGGGAA CGGTACAGGA CGATGCGGCG
GTTTTTGGTG AAGACACCGC GTCGCAGGTC GTCGGCGATC TGGAGCTCTC GGCCGCCGAC
GCGGAGGCTG AAATCGCGGA AGTGAGTCTT GAGGTCCAGG AGCTCGATGG CGATGCGCTC
GAGGACCCGG CGCTCGAGGC CGAGGAACTG ATCGCCGAGC AGGACGATGA GGTCGTTGCC
GAACTGGTCG ATGCTACGGC CGAGGCCGAG GGCGAAGCGG AACTCTCGGA CGAAGCCGAG
GCCGAGATCG ATGGCGAGGC CGCGGATGAC GAAGGCGACC GCGATACCGG CGAGGATGAC
TCGTCCCACC GGGGCTAA
 
Protein sequence
MASLAELRME EPDEIVASEP EVRPEELRIL EALLFASAEP LEQATLAKRM PEGVDIKAAL 
AQLQAEYANR GVNLVRVANK WTFRTAGDLA WLMTRESTET RKLSRAAIEV LAIVAYHQPV
TRAEIEEIRG VVTSKGTLDV LLETGWIKPR GRRKTPGRPL TFGTTDAFLA QFSLETLGDL
PGLEELKGTG LLDSRLPTGF TVPTPSDDPT LRDDEEPLDP GDLDLALAPA VEVEAGEAEA
TEATTAEAEA TVAEADVSET GSIDTLAETP EVGTVQDDAA VFGEDTASQV VGDLELSAAD
AEAEIAEVSL EVQELDGDAL EDPALEAEEL IAEQDDEVVA ELVDATAEAE GEAELSDEAE
AEIDGEAADD EGDRDTGEDD SSHRG