| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4409 |
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| Symbol | |
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| ID | 5153174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4621965 |
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| End bp | 4623419 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640559217 |
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| Product | putative peptidoglycan-binding LysM |
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| Protein accession | YP_001240354 |
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| Protein GI | 148255769 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.35842 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCTA TCGTCGAGTT GCCTCGCTCG CGCCGCCTGC CGCAGTTCGC GGCGCTGGCG
CTGATGTCAT TCGGCGTTGC CGGCTGCAGC GCCGATATGT CGACGCGGCT GTCGCAAGCG
CAAAATCCCT TTTCGAATCC CTTCGCCTCC GACGCCACCG GTTCGGTGCA GGCGCCCCCG
CGGCAGCATC AGCCGGTCGC TCAGCAATAC ACGCCCGCAC CTGCGCCGGC CCCCACTTAT
TCGTCCTCGG CGCTGCCGCC GCCGGCGGTC GCCACGCCGC AATCCTATCC ATCCGGCGGC
GGGTCTGGAG GCGTGTCGGG CGGCGGGCGC GGCGTTGCGT CCTATGTGCC ACCGGCGGCG
GTCCCGGCGG CAGCGCCGCA ACCGGCTTAC GCCCAGCCGA CCCATTCCTA TGCGCCGCCG
GCGCAGCCGC AGCTCGAGAC CACGGGGGCC GTGCCGCCTC GCTCGGTTGC CGCGGCGCGT
CCGACGGGAG GCACCAAGAT CATCGTCGGG ACCAGCGATA CGCTCGAGAT CCTGGCCAAG
CGCTACCGGG TGAGCCCGGC TGAGATCCTT GCGGCCAATG GCTACAAGGG CCCGCGCGCG
CTGTCGCCGG GGCAGCAGCT GACCATTCCG CATCCGGGCG CGGTCGCTGC AGCGCCGGCG
GCTCAGCCCG TCGCGACGCC CGTGGCTGCG GCGCCGGTCG CGCCGAAGCC GGTGGCGGTT
GCAGCAGCCA CGGCCCCGTC CACCGTGCAT TTCGTCAATC GCGGCGAGAC GCTTGCCAGC
ATCGCGCGCC AGAACCATCT GACGCCGGCC GAGCTCGCCC GCGCCAACAA TCTCGATCAG
GCTTCGCCCT TGAAGCTCGG TGCCAGGCTG ACCGTCCCTG CCAAGGCCGC TGCTGTGGCT
GCACCCGTGG CTCCGGTCGC AACCGTTCCC CAGGCGGTTG CGACCGTGCC GGCCCCGGCG
CCGACCACCC GGGTGGCGGC GGCGGGTCCG GTCCAGACCG CTCGGCTGGC GCAGGCCAAT
CCGGCGCCTG AGAAAGAGGA GGAGCCGGCG CGCCCGGCCG AGACCACCAG CTCGCTGCCG
ACCTTCCGCT GGCCGGCACG GGGCAAGGTG ATCACGAGCT ACGGCGCCAA GACCAACGGC
AAATCCAACG ACGGCATCAA CATCGCTGTG CCGGAGGGCA CGCCGGTGAA GGCCGCCGAG
GATGGCGTCG TGGCCTATGC CGGCAACGAA CTGAAGGGAT ATGGCAATCT GGTCCTGGTG
CGGCATTCCA ACGGCTATGT CACCGCATAT GCCCATGCGA GTGAGCTGAT GGTGAAGCGC
GGTGATCCGA TCAAGCGCGG CCAGGTCATT GCCAAGTCGG GTCAATCGGG AGAGGTCGGA
TCGCCGCAGC TCCACTTCGA GATCCGCAAG GGATCGTCGC CGGTTGACCC GCTGCAATTC
CTCAACGGGG CGTGA
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| Protein sequence | MPAIVELPRS RRLPQFAALA LMSFGVAGCS ADMSTRLSQA QNPFSNPFAS DATGSVQAPP
RQHQPVAQQY TPAPAPAPTY SSSALPPPAV ATPQSYPSGG GSGGVSGGGR GVASYVPPAA
VPAAAPQPAY AQPTHSYAPP AQPQLETTGA VPPRSVAAAR PTGGTKIIVG TSDTLEILAK
RYRVSPAEIL AANGYKGPRA LSPGQQLTIP HPGAVAAAPA AQPVATPVAA APVAPKPVAV
AAATAPSTVH FVNRGETLAS IARQNHLTPA ELARANNLDQ ASPLKLGARL TVPAKAAAVA
APVAPVATVP QAVATVPAPA PTTRVAAAGP VQTARLAQAN PAPEKEEEPA RPAETTSSLP
TFRWPARGKV ITSYGAKTNG KSNDGINIAV PEGTPVKAAE DGVVAYAGNE LKGYGNLVLV
RHSNGYVTAY AHASELMVKR GDPIKRGQVI AKSGQSGEVG SPQLHFEIRK GSSPVDPLQF
LNGA
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