| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4399 |
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| Symbol | |
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| ID | 5153104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 4611751 |
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| End bp | 4613148 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640559207 |
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| Product | tRNA (uracil-5-)-methyltransferase Gid |
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| Protein accession | YP_001240344 |
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| Protein GI | 148255759 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
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| TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0558051 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGGCG CCGGGCTGGC CGGATCCGAG GCTGCGTGGC AGCTCGCGGA AGCGGGTGTG
GACGTCGTTC TGCACGAGAT GCGGCCGGAC CGCATGACCG AGGCGCATCG GACTGCGACG
CCGGCAGAGC TTGTCTGCTC CAACTCGTTC CGTTCGGACG ATGCCGCCAA CAACGCCGTC
GGCCTGCTTC ATGCCGAGAT GCGCCGCTTG GGCTCCCTCA TCATGCGCGC GGCCGACGCA
AACCAGGTTC CGGCCGGCGG AGCGCTGGCG GTCGACCGTG AGGGCTTTTC GGCAGCCGTG
GCCACCGCTC TGAACGGGCA TCCGCGGATC GAACTGCGGC GCGGCGAGAT CACCGGCCTG
CCGCCTTCCG ACTGGGACAA TGTCATCATC GCCACCGGCC CCCTCACCTC TCAGCCGCTG
GCCGAAGCGA TTCGCGACCT GACCGACGAG ACCGCGCTCG CCTTCTTCGA TGCCATCGCG
CCGATCGTGC ACAGGGACAC GATCGACATG TCCAAGGCCT GGTTCCAGTC GCGCTACGAC
AAGGTCGGCC CCGGTGGCAC CGGCGCCGAC TACATCAACT GCCCGATGAC CAAGGACCAG
TACGACACAT TCGTTGCGGC CCTGCTCGCC GGCGAGAAGA CCGACTTCAA GGACTGGGAG
ACCAACACGC CCTATTTCGA CGGCTGCCTG CCGATCGAGG TGATGGCCGA GCGCGGCCAT
GAGACGCTGC GCCATGGTCC GATGAAGCCG GTCGGCCTGA CCAATCCGCA CAACCCGACA
GTCAAGCCGC ATGCCATCGT GCAGTTGCGC CAGGACAACA AGCTCGGCAC GCTCTACAAC
ATGGTCGGCT TCCAGACGAA GCTGAAATAC GGCCCGCAAC AGCAGATCTT CCGCACCATC
CCCGGGCTCG AGAACGCCGA ATTCGCGCGG CTCGGTGGCC TGCATCGCAA CACGTTCCTC
AACTCGCCGA AATTGCTCGA TGCGCAGCTG CGTCTGCGCG CTCAGCCGCG GCTTCGTTTT
GCCGGCCAGA TGACGGGCTG CGAGGGCTAT GTCGAGTCGG CCAGCATCGG TCTCATCGCC
GGATTGTACG CGGCTGCGGA AGCGCGCGGC ACAGGCCTGT CGCCGCCCCC CGCCACCACC
GCGCTCGGCG CCCTGCTCGG CCACATCACC GGCGGGCATA TCGAGACGAT CGACGGCGCG
ACGCGCTCCT TTCAGCCGAT GAACATCAAT TTCGGCCTGT TCCCACCATT GGCGGTGGCG
CCGACCCGAA AGCCCGATGG CAGCCGATTG AAGGGCAATG AGAAGACCGT CGCGAAGAAG
CAGGCGCTGA GCGCCCGCGC ACTGGCAGAT CTCGATGGCT GGATCGCCGA ACATCTGCGC
GTCGCCGCGG CTGCATGA
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| Protein sequence | MIGAGLAGSE AAWQLAEAGV DVVLHEMRPD RMTEAHRTAT PAELVCSNSF RSDDAANNAV
GLLHAEMRRL GSLIMRAADA NQVPAGGALA VDREGFSAAV ATALNGHPRI ELRRGEITGL
PPSDWDNVII ATGPLTSQPL AEAIRDLTDE TALAFFDAIA PIVHRDTIDM SKAWFQSRYD
KVGPGGTGAD YINCPMTKDQ YDTFVAALLA GEKTDFKDWE TNTPYFDGCL PIEVMAERGH
ETLRHGPMKP VGLTNPHNPT VKPHAIVQLR QDNKLGTLYN MVGFQTKLKY GPQQQIFRTI
PGLENAEFAR LGGLHRNTFL NSPKLLDAQL RLRAQPRLRF AGQMTGCEGY VESASIGLIA
GLYAAAEARG TGLSPPPATT ALGALLGHIT GGHIETIDGA TRSFQPMNIN FGLFPPLAVA
PTRKPDGSRL KGNEKTVAKK QALSARALAD LDGWIAEHLR VAAAA
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