Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4376 |
Symbol | |
ID | 5153260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 4591544 |
End bp | 4592326 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640559186 |
Product | putative outer-membrane protein |
Protein accession | YP_001240323 |
Protein GI | 148255738 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3637] Opacity protein and related surface antigens |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.36541 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0609964 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGCA CTCTGTTTGT CACCGCCGGC GTCGCTGCGC TGGGCCTGGC GCCCGCCTCG GCCGCCGATT TCGCCGCGCG TCCGTATGGC AAGGCACCGC CGCCGGCCTA TGTCACGCCG CTGCCGAGCT GGGCCGGCTT CTACCTCGGC GCCAATGGCG GTGCGGACTG GAGCCGCAAT TGCTGGACGC TGAACCGGGT CAACGGTGTG CCGGTCGTGC CGACACAATC CGAAGGATGC CACAACGCCA CCAGCGGCCT CATCGGCGGC CAGATCGGCT ATCGCTGGCA GGCCGCAAGC TGGGTGTTCG GCCTCGAGGC CCAGGGCAAC TGGACCGACC TGAAATCCTC GAATGCCAGC TCGGCCGCAT TCGCGGCGGG CATTACCAAC AACACCAAGA CCGACGCGAT CGGGCTGTTC ACCGGCCAGA TCGGCTATGC CTGGGGCAAC GTGCTCTGGT ACGTCAAGGG CGGCGCCGCG GTCGCGCATA ACAAATACAC CGGGACGGCC AATGCGGCAG CGCCCGTGGC CGTGGGCACC CTGCTGGATT CAGCAAGCGA GACGCGCTGG GGCGGCACCG TCGGCACCGG CGTCGAGTTC GGCTTCGCAC CGAACTGGTC GGTGGCGGTC GAGTACGATC ACCTGTTCAT GGGATCGCGC GACATCACCT TCCCGGCCAC CGCCATCGTC AACGCCCGCG TCGACACCAT CAAGCAGGAC ATCGACATGG CGACCGTCAG GGTCAACTAC CGATTCGGCG GCCCGGCGGC GGCGCGCTAT TGA
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Protein sequence | MKSTLFVTAG VAALGLAPAS AADFAARPYG KAPPPAYVTP LPSWAGFYLG ANGGADWSRN CWTLNRVNGV PVVPTQSEGC HNATSGLIGG QIGYRWQAAS WVFGLEAQGN WTDLKSSNAS SAAFAAGITN NTKTDAIGLF TGQIGYAWGN VLWYVKGGAA VAHNKYTGTA NAAAPVAVGT LLDSASETRW GGTVGTGVEF GFAPNWSVAV EYDHLFMGSR DITFPATAIV NARVDTIKQD IDMATVRVNY RFGGPAAARY
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