Gene BBta_4376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4376 
Symbol 
ID5153260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4591544 
End bp4592326 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content67% 
IMG OID640559186 
Productputative outer-membrane protein 
Protein accessionYP_001240323 
Protein GI148255738 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.36541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0609964 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGCA CTCTGTTTGT CACCGCCGGC GTCGCTGCGC TGGGCCTGGC GCCCGCCTCG 
GCCGCCGATT TCGCCGCGCG TCCGTATGGC AAGGCACCGC CGCCGGCCTA TGTCACGCCG
CTGCCGAGCT GGGCCGGCTT CTACCTCGGC GCCAATGGCG GTGCGGACTG GAGCCGCAAT
TGCTGGACGC TGAACCGGGT CAACGGTGTG CCGGTCGTGC CGACACAATC CGAAGGATGC
CACAACGCCA CCAGCGGCCT CATCGGCGGC CAGATCGGCT ATCGCTGGCA GGCCGCAAGC
TGGGTGTTCG GCCTCGAGGC CCAGGGCAAC TGGACCGACC TGAAATCCTC GAATGCCAGC
TCGGCCGCAT TCGCGGCGGG CATTACCAAC AACACCAAGA CCGACGCGAT CGGGCTGTTC
ACCGGCCAGA TCGGCTATGC CTGGGGCAAC GTGCTCTGGT ACGTCAAGGG CGGCGCCGCG
GTCGCGCATA ACAAATACAC CGGGACGGCC AATGCGGCAG CGCCCGTGGC CGTGGGCACC
CTGCTGGATT CAGCAAGCGA GACGCGCTGG GGCGGCACCG TCGGCACCGG CGTCGAGTTC
GGCTTCGCAC CGAACTGGTC GGTGGCGGTC GAGTACGATC ACCTGTTCAT GGGATCGCGC
GACATCACCT TCCCGGCCAC CGCCATCGTC AACGCCCGCG TCGACACCAT CAAGCAGGAC
ATCGACATGG CGACCGTCAG GGTCAACTAC CGATTCGGCG GCCCGGCGGC GGCGCGCTAT
TGA
 
Protein sequence
MKSTLFVTAG VAALGLAPAS AADFAARPYG KAPPPAYVTP LPSWAGFYLG ANGGADWSRN 
CWTLNRVNGV PVVPTQSEGC HNATSGLIGG QIGYRWQAAS WVFGLEAQGN WTDLKSSNAS
SAAFAAGITN NTKTDAIGLF TGQIGYAWGN VLWYVKGGAA VAHNKYTGTA NAAAPVAVGT
LLDSASETRW GGTVGTGVEF GFAPNWSVAV EYDHLFMGSR DITFPATAIV NARVDTIKQD
IDMATVRVNY RFGGPAAARY