Gene BBta_4374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4374 
Symbol 
ID5152936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4589614 
End bp4590360 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content66% 
IMG OID640559184 
Productputative outer-membrane protein 
Protein accessionYP_001240321 
Protein GI148255736 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0950016 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGAG TTTTTCTTGG AGCCGTCAGC TTGATGGTTT TGGGCGCCCT GGCGCCCGCG 
GGAGCCGCCG ATCTTGCCGC CCGCCCCTAC ACCAAGGCGC CGATGGCGGC GCCCGCACCG
CTTCCGACCT GGACCGGCTT CTACATCGGT CTGCAGGGCG GCGGCGGCTG GGGCCGCAGC
GATGAGACCT TCTTCAACGC GCCGAACGGA TTCGGCTTTG CCGGCACGCA GCGCTACGAC
ATCAATGGCG GCTTCGCCGG CGGCGTGATC GGCTACAATT GGCAGGTCGA CAACATCGTG
TTCGGCCTCG AGGGCGACTA CCACTGGGCC GACATCAACG GCCGCTCGGG TGTCATCACC
GCGGGCCTCG GCGACAGCTA CTTCACCAAG CTGCGTGGCT TCGGCGACAT CAAGGGCCGG
CTCGGCTGGG CGGCGGGTCC GGCGCTCTTC TTCGTCAGCG GCGGTGCCGC CGTCGGCGAC
CTGCAGCACC GCTACGACAA TCCAGCCTTC AGCACCATCC AGAACGACTG GCGCTGGGGC
TGGACGATCG GTGCCGGCGC CGAATACATG TTCGCCCCGA ACTGGTCGGC GAAGGTCGAG
TACAACTATC TCGACTTTGG CAAGAGCACG CTCCAGTACA ACAACCCACT GGTGGCATCC
AACCGCTCCG AGTGGAGCGA TACGGTTCAC ACCGTCAAGG CGGGCATCTC CTACCACTTC
GGTGGTCCGG GCGTGTCGCG CTACTGA
 
Protein sequence
MKRVFLGAVS LMVLGALAPA GAADLAARPY TKAPMAAPAP LPTWTGFYIG LQGGGGWGRS 
DETFFNAPNG FGFAGTQRYD INGGFAGGVI GYNWQVDNIV FGLEGDYHWA DINGRSGVIT
AGLGDSYFTK LRGFGDIKGR LGWAAGPALF FVSGGAAVGD LQHRYDNPAF STIQNDWRWG
WTIGAGAEYM FAPNWSAKVE YNYLDFGKST LQYNNPLVAS NRSEWSDTVH TVKAGISYHF
GGPGVSRY