| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4356 |
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| Symbol | kaiC |
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| ID | 5152759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4574059 |
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| End bp | 4575588 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640559168 |
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| Product | circadian clock protein KaiC |
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| Protein accession | YP_001240305 |
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| Protein GI | 148255720 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
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| TIGRFAM ID | [TIGR02655] circadian clock protein KaiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.118548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGA GTAGGGCTTT CGAACTTGAG AAATTGCGCA CCGGCATCGC CGGATTCGAT
CAGATTTCGA ACGGTGGCCT GCCACTGAAT CGAAGCACGC TGGTCTCCGG CACAGCCGGC
AGCGGAAAGA CCGTGCTCGC GCTGCAGTTT CTCGTCATGG GCGTGCAGAC CTGTGCCGAG
CATGGCGTCT GTGTCACGTT CGAGGAGGCT CCAGAGGACC TGATGCGCAA CGTCGCGTCG
TTCGGCTGGG ACTTCGAATC CTTGAACCGG AACGGCCAGA TCGCGATTGT TGATGCCACG
CCGGAGCAGG GCGAGGAGAT GGTCGAGGCC GGCGCCTATG ATCTCTCGGC GCTGATGGTC
CGGATCGAGA ATGCGATCCG GAAGGTCAAT GCGAAGCGGG TGGTGCTGGA TTCGGTCGGC
GCGCTGTTTC CGCAGTTCTC GGACGCCAAT GTGGTGCGCC GGGAACTGCA CCGCATCGCC
AGCGCGCTGC GGCTGCTTGG CGTGACCACG ATCATCACGA TGGAACGTCT CGACGAGGAT
GGCGGGCTGG CGCGCTTCGG CGTCGAGGAG TTCGTGGCCG ACAACGTCCT GGTGCTGCGC
AACCGGCTCG AGCAGGAAAA GCGCAGGCGG ACCATCGAGA TCCTGAAATT TCGTGGCGCC
ACGCATCAGA AGGGCGAGTA TCCGTTTACG GTCGACCACG CCGAGGGTGT TACGATTATT
CCGCTCTCGG CCATCGAGCT GAAGCAGCGC TCGAGCGATC TCCGGGTATC CTCCGGCGTG
CCCGAGCTCG ATCAGATGTG CGGCGGTGGC TTCTACCGCG ACTCCATCAT TCTGGTGAGC
GGAGCCACCG GCACCGGCAA GACGCTGATG GTGACGCATT ACCTGAGGGC CGCCATCGAG
CGCGGGGAAC GTGCGCTGTT GATCGCGGCG GAGGAGAGCC GGGAACAGTT GACCCGCAAT
GCGTCGAATT GGAACGTCGA TTTCGATTCA GCGGAGAAGG AGGGTCTTCT CCGCATCATT
GCCAGATACC CCGAGACCAT GGGCCTGGAG GATCACCTGC TCTACATCCA GCGGGAGATC
AACGAGTTCC AGCCGAGCCG GATTGCGGTC GACAGCCTGT CGGCCTTCGA GCGCGCGGGC
ACGCCGAAAT CCTATCGAGA ATTCGTCATT GCGCTGACGA GTCATATCAA GAAGGTCGGG
ATCACCGGGC TTTTCACCAA CACGACATCG ATGCTGATGG GCGGCGCGTC GATCACCGAG
ACCCATATCT CCACCATCAC CGACATGATC GTGCTGCTGC GCTACGTCGA GCTCTATGGC
GTGATGCGGC GTGGCCTGGC GATCCTGAAG ATGCGCGGCA CGCAGCACGA CAAGGACATC
CGCGAGTATG TCATTGACGG TCACGGCATG CATCTGGTCT CCACCTTCCG CGACGTGCAC
GGAATTCTGA CGGGGGCTCC CACCTACATG TTTGCACGCG AGCGCGACCA TCTTGCCGAG
ATGTTTGGCG GATCGCAAAG CGAGCTCTAG
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| Protein sequence | MSASRAFELE KLRTGIAGFD QISNGGLPLN RSTLVSGTAG SGKTVLALQF LVMGVQTCAE
HGVCVTFEEA PEDLMRNVAS FGWDFESLNR NGQIAIVDAT PEQGEEMVEA GAYDLSALMV
RIENAIRKVN AKRVVLDSVG ALFPQFSDAN VVRRELHRIA SALRLLGVTT IITMERLDED
GGLARFGVEE FVADNVLVLR NRLEQEKRRR TIEILKFRGA THQKGEYPFT VDHAEGVTII
PLSAIELKQR SSDLRVSSGV PELDQMCGGG FYRDSIILVS GATGTGKTLM VTHYLRAAIE
RGERALLIAA EESREQLTRN ASNWNVDFDS AEKEGLLRII ARYPETMGLE DHLLYIQREI
NEFQPSRIAV DSLSAFERAG TPKSYREFVI ALTSHIKKVG ITGLFTNTTS MLMGGASITE
THISTITDMI VLLRYVELYG VMRRGLAILK MRGTQHDKDI REYVIDGHGM HLVSTFRDVH
GILTGAPTYM FARERDHLAE MFGGSQSEL
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