Gene BBta_4344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4344 
Symbol 
ID5152295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4564833 
End bp4565426 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content67% 
IMG OID640559158 
Productputative methionyl-tRNA formyltransferase 
Protein accessionYP_001240295 
Protein GI148255710 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.291345 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCA CCCTCGTCGG CTCCCGCCAT TTCGGTGTGG CCACACTGAA CATGCTGCGT 
GAGAGAGGCA TCGAGATCGC GCGGGTCGTC GTGCATGATG GCGAGGACAG GCTCGCCGCG
GCGGCGCGTG CGGCCGGCAT CGAGGTTCTC GTTCAGGCCA ACCCGAAGGT GGTGCCTGCG
AACGAGATCG CCCCGGGGAC GGATCTGATC GTCACCGCCC ACAGCCATGC CCGCGTGACG
CAGGAGGCGG TCCAGGCGGC ACCGCTGGGT GGCATCGGCT ATCATCCTTC GCTGCTGCCG
CGGCATCGCG GCATTGCGGC CGTGGAGTGG ACTGTCAAAG AGGGCGATCC GATCGCGGGC
GGCACGATCT ATCATCTGGC CGAGCGCATG GATGCCGGCG CCATTGCCGC GCAGGATTGG
TGCTTTGTGA AGAAGGGCGA AACGGCCCGC GAATTGTGGG AGCGCGCGCT GGCGCCGCTC
GGCCTCAAGC TGTTCGGCGA CGTCGTCGAA TATGCCAAAG CCCATGGCAC GATCCCCGCC
AAGCCGCAGG ACGAGCAGTT CGCGACCAAG GCGCCGAGCC TGACGCCGCA CTGA
 
Protein sequence
MRITLVGSRH FGVATLNMLR ERGIEIARVV VHDGEDRLAA AARAAGIEVL VQANPKVVPA 
NEIAPGTDLI VTAHSHARVT QEAVQAAPLG GIGYHPSLLP RHRGIAAVEW TVKEGDPIAG
GTIYHLAERM DAGAIAAQDW CFVKKGETAR ELWERALAPL GLKLFGDVVE YAKAHGTIPA
KPQDEQFATK APSLTPH