| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4328 |
|---|
| Symbol | |
|---|
| ID | 5151595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 4534995 |
|---|
| End bp | 4535972 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640559143 |
|---|
| Product | putative ABC transporter, permease protein |
|---|
| Protein accession | YP_001240280 |
|---|
| Protein GI | 148255695 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATTT TGAGCCTTGC GGGGCGGCGG CTCGCCGCCT CGATCCCTAC TTTGGTCCTG
ATCCTGGTCG GCGTCTTTCT GCTGCTGCAG CTCGCGCCGG GCGACACGGT CGACGCGATG
ATGGCGCAGA TGGGCGGCGG TGATGCCGCC ACCGCGCGTG AGCTCCGCCG CTTCTACGGG
CTGGACCTGT CGATCCCGAT GCAGCTCGCC AACTATCTGT GGCGCCTGGT GCGGCTCGAT
CTCGGCTTCT CCGCGATCTA CGGCAAGCCG GTCGCGACCG TGATCCTCGA ACGGCTGCCG
CCGACCTTGC TGCTGATGAC CTCGGCGCTG TCCTTCGCGT TCTTCTTCGG CCTGGTGTTC
GGGGTGATCG CCGCGCGCGG CGTCAACCGC TGGCCGGACA CGCTGATCTC CACGGTCGGT
CTGATCTTCT ACGCCACGCC CTCCTTCTGG TTCGGCCTGA TGGCCATTGT CGTGTTCTCG
ATCTATCTGC AATGGCTGCC CGCCGGCGGC TTCGAGGATA TCGGCGCGAT CAGGACCGGG
ATCTGGCGGG TGCTCGACAT CGCCAGCCAT CTGATCCTGC CGTCGCTGAC CTTGGGCCTG
ATCTTCCTGG CCATCTATCT CCGCATCATG CGGGCATCGA TGCTCGAAGT GCTCAATCTC
GATTTTGTCC GCACGGCGCG CGCCAAGGGC CTCGACGAGA CAAGGATCAT CACCCGCCAC
GTGCTGCGCA ACGCGCTGCT GCCGATGGTG ACGCTGATCG GACTGCAGGC CGGGACCATG
CTCGGCGGCT CGGTCGTGGT CGAGACCGTC TTCTCGCTGC CGGGCCTTGG ACGCCTGGCC
TATGAATCCG TGGTGCAGCG CGACCTCAAC ACGCTGCTGG GAATCGTCTT CGTCTCCGCG
TTGCTGGTGA TCCTGGTCAA CTTCGTCACC GACCTGCTTT ACGCGCGGCT CGACCCGCGC
ATCGCGGCCG AGAGCTAG
|
|---|
| Protein sequence | MRILSLAGRR LAASIPTLVL ILVGVFLLLQ LAPGDTVDAM MAQMGGGDAA TARELRRFYG
LDLSIPMQLA NYLWRLVRLD LGFSAIYGKP VATVILERLP PTLLLMTSAL SFAFFFGLVF
GVIAARGVNR WPDTLISTVG LIFYATPSFW FGLMAIVVFS IYLQWLPAGG FEDIGAIRTG
IWRVLDIASH LILPSLTLGL IFLAIYLRIM RASMLEVLNL DFVRTARAKG LDETRIITRH
VLRNALLPMV TLIGLQAGTM LGGSVVVETV FSLPGLGRLA YESVVQRDLN TLLGIVFVSA
LLVILVNFVT DLLYARLDPR IAAES
|
|---|
| |