Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4318 |
Symbol | |
ID | 5151757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 4525782 |
End bp | 4526342 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640559134 |
Product | putative intracellular proteinase |
Protein accession | YP_001240271 |
Protein GI | 148255686 |
COG category | [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase |
TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.176373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATCA AGGGAAAGAA GATCGCCATT CTCGCCACGA ACGGCTTCGA ACAAGCGGAG CTCGAAGTGC CGCGCGATCG CTTGAAGCAG GCCGGGGCGA CCGTCGACGT GATCTCGCTC GCCGCCGGCC AGATCAAGGG CTGGGACCAG AAGGATTGGG GACGCCCCGT CAAGGTCGAC AAGACGCTCG ACCAGGCATC GGCATCGGAC TACGACGCCA TCGTGCTGCC AGGCGGCCAG ATCAACCCGG ACCTGTTGCG CCTCGAGCCG AAGGCGCTGA AATTCATCAA GGACATCTTT GAGGCAAAGA AGATCGTGGC CGCGGTCTGT CATGCGCCAT GGCTGCTGAT CGAGACGGGC ATCGCGAAAG GTCGCAAGAT GACGTCCTAC AAGTCCATCA AGACCGACGT CGTGAATGCC GGTGCCGATT GGCAGGATGA GGCGGTCGTC GTCGACCAAG GTGTCATCAC GTCGCGCAAT CCCGGCGATC TGGAAGCCTT CAGCGCCAAG ATCATCGAGG AGGTCAAAGA GGGCCGGCAT CTGCAGCGGA GCGCCGCTTG A
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Protein sequence | MDIKGKKIAI LATNGFEQAE LEVPRDRLKQ AGATVDVISL AAGQIKGWDQ KDWGRPVKVD KTLDQASASD YDAIVLPGGQ INPDLLRLEP KALKFIKDIF EAKKIVAAVC HAPWLLIETG IAKGRKMTSY KSIKTDVVNA GADWQDEAVV VDQGVITSRN PGDLEAFSAK IIEEVKEGRH LQRSAA
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