Gene BBta_4318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4318 
Symbol 
ID5151757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4525782 
End bp4526342 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content61% 
IMG OID640559134 
Productputative intracellular proteinase 
Protein accessionYP_001240271 
Protein GI148255686 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID[TIGR01382] intracellular protease, PfpI family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.176373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATCA AGGGAAAGAA GATCGCCATT CTCGCCACGA ACGGCTTCGA ACAAGCGGAG 
CTCGAAGTGC CGCGCGATCG CTTGAAGCAG GCCGGGGCGA CCGTCGACGT GATCTCGCTC
GCCGCCGGCC AGATCAAGGG CTGGGACCAG AAGGATTGGG GACGCCCCGT CAAGGTCGAC
AAGACGCTCG ACCAGGCATC GGCATCGGAC TACGACGCCA TCGTGCTGCC AGGCGGCCAG
ATCAACCCGG ACCTGTTGCG CCTCGAGCCG AAGGCGCTGA AATTCATCAA GGACATCTTT
GAGGCAAAGA AGATCGTGGC CGCGGTCTGT CATGCGCCAT GGCTGCTGAT CGAGACGGGC
ATCGCGAAAG GTCGCAAGAT GACGTCCTAC AAGTCCATCA AGACCGACGT CGTGAATGCC
GGTGCCGATT GGCAGGATGA GGCGGTCGTC GTCGACCAAG GTGTCATCAC GTCGCGCAAT
CCCGGCGATC TGGAAGCCTT CAGCGCCAAG ATCATCGAGG AGGTCAAAGA GGGCCGGCAT
CTGCAGCGGA GCGCCGCTTG A
 
Protein sequence
MDIKGKKIAI LATNGFEQAE LEVPRDRLKQ AGATVDVISL AAGQIKGWDQ KDWGRPVKVD 
KTLDQASASD YDAIVLPGGQ INPDLLRLEP KALKFIKDIF EAKKIVAAVC HAPWLLIETG
IAKGRKMTSY KSIKTDVVNA GADWQDEAVV VDQGVITSRN PGDLEAFSAK IIEEVKEGRH
LQRSAA