Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4317 |
Symbol | |
ID | 5151764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 4524080 |
End bp | 4525579 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640559133 |
Product | sensor histidine kinase |
Protein accession | YP_001240270 |
Protein GI | 148255685 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.305311 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCATGG AACATGAAAA GGTCAACATC CTCCTGGTTG ACGACCAGCC CGCGAAGCTG CTGGCCTATG AGGTCATCCT CAAGGAACTC GGCGAAAACC TCGTGGTCGC CACGTCAGGC CGCGCGGCGC TTGAGATTCT CCTGAAGAAC GAGATCGCGG TCATCCTCGT GGACGTCTGC ATGCCGGAGC TCGACGGCTT CGAGCTGGCG CAGATGATCC GTGAGCATCC GCGGTTTCAG AAGATCGCGA TCATCTTCAT CTCGGCGGTT CAAGTCAGCG ATTTCGACCG GTTGCGCGGC TATGAAATGG GCGCGGTCGA CTATGTGCCG GTGCCGGTCG TGCCGGAGGT CTTGCGCGCG AAGATCAAGG TGTTCACCGA GCTCTATCGC AAGACGCGCG AGCTGGAACA TTTGAACCAG GAGCTCGAGA ACCGCGTTCG CGCGCGCACC GCAGAGCTCG AAAGATCCAC GGCCCAGCTA CTGGAGAGCG AGCAGCGCCG CAGCATGGCC ATCGCGGCCG GAAGGATGGG GTCCTGGGAC TGGGACGGCA TCAATGGCGA CTGGATGTGG GACGAAGGCC AATACCGCAT CTTCGGCGTC ACGCCGCAGA CCTTCGAGCT CAACAACGTC AACATCATGA GCCTCTTGCA TCCCGACGAC GCCGAGCGTG CGCGGCAGGT GGTCGCCGAG CTCGGCCGGG GCACGACGTC CTGCGAGGCC GAGTTCCGCA TCAACAGGCC CGATGGCGAA CAGCGCTGGT GCGTTGGAAC GGCGGCGGCG ACGACCGACA AGGCTGGACG CGTGATCCGG GTCAGCGGCG TCACCATCGA CATTACCGAG CGCAAGCGCG CCGAAGAGCG CCAGAACCTA TTGACCCGCG AGGTCGATCA CCGGGCCAAG AACGCGCTGA CCCTGGCGCA GTCGATCGTG AGGCTCACCA AGGCTGACAG CGTGCGGACC TATGTCAGCG CAGTCGAGGG CCGCATCAGC GCGCTCGCAC GCGTTCACAC CATTCTCTCG CTTTCGAGCT GGCAGGGCGC AGAGATCAGC CGGCTGATCG GCGAGGAGCT CGCGCCCTAT GCGACCGGCG GACAGGTGGC GTTCGGCGGT GCCGAACTCC AGCTCCAGCC GGCGACGGCA CAAACCCTGG CGCTGGCCCT GCACGAGCTG GTGACGAACT CGGCCAAATA CGGCGCCCTG TCGGTCCGCT CTGGTCATCT CTCGGTCAAA TGGACCATCG AGGACGATGT TCTCGAGATC GTGTGGATCG AAACCGGCGG GCCGCGGGTC CACGTGCCGA CCTCCCGCGG ATTTGGGACC CGCAGCCTGA TGGCAAGCGT CGAGAGCCAA CTCGGCGGGC GGGCTTTGTT TGACTGGCGG CCCGAAGGGC TGGTCTGTCG GTTGATCGTG CCCTTGCGTC CGGGCGCGAT GCCGCCGGAA ATGACCAGCG CCTTCACGAG CGCGGCGCCC AAGGCAGCCC GACAGCGGGC CGCCGGCTGA
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Protein sequence | MIMEHEKVNI LLVDDQPAKL LAYEVILKEL GENLVVATSG RAALEILLKN EIAVILVDVC MPELDGFELA QMIREHPRFQ KIAIIFISAV QVSDFDRLRG YEMGAVDYVP VPVVPEVLRA KIKVFTELYR KTRELEHLNQ ELENRVRART AELERSTAQL LESEQRRSMA IAAGRMGSWD WDGINGDWMW DEGQYRIFGV TPQTFELNNV NIMSLLHPDD AERARQVVAE LGRGTTSCEA EFRINRPDGE QRWCVGTAAA TTDKAGRVIR VSGVTIDITE RKRAEERQNL LTREVDHRAK NALTLAQSIV RLTKADSVRT YVSAVEGRIS ALARVHTILS LSSWQGAEIS RLIGEELAPY ATGGQVAFGG AELQLQPATA QTLALALHEL VTNSAKYGAL SVRSGHLSVK WTIEDDVLEI VWIETGGPRV HVPTSRGFGT RSLMASVESQ LGGRALFDWR PEGLVCRLIV PLRPGAMPPE MTSAFTSAAP KAARQRAAG
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