Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4296 |
Symbol | |
ID | 5149393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 4500574 |
End bp | 4501629 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640559115 |
Product | putative branched-chain amino acid ABC transporter, permease protein |
Protein accession | YP_001240252 |
Protein GI | 148255667 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.258747 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00201809 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACGACGA TCTCCGAAGC CGCTCCTACA CCGGCGCGAT CCTCGCTGCT CAACGCCAAT GTGCTCGGCA TCGTGCTGCT GCTGGTGCTC GCTTACGGCC TCGTGCCGCT GATCGGCTCC GACTATCTGA TGGACGCGGT GCTGACGCCA TTCCTGGCAT TGGCGCTGGC CGCAGTCGGG CTCAACGTGC TGACCGGCTA TGCCGGTCAG GTGTCGCTGG GCTCGGCGGC GTTCCTCGCG GTCGGCGCTT ATGCTGCCTA TAATCTCAAT CTGAGGTTGC CGCAATTGCC GCTGCTCGCC GACATCGTGT TGGCCGGCGG CATCGCCGCC GCGGTCGGAA TCATCTTCGG CCTGCCGAGC CTGCGGCTGC GCGGCTTCTA TCTCGCGGTC TCGACGCTCG CGGCGCAGTT CTTCGTGCAG TGGGCGCTGA CCAAGTTCGG CTGGTTCTCG AACGACAATG CGTCGGGGGT GATCGACGCG CCCGTCATTC GCGTCGGCAG CCTGACCTTC ACGAGCGCGA CCGGACGCTA CGTGTTCTCG TTGACGATCG TCGCGGTCGC CACCGTGCTG ACGGCGCGGC TGCTGTCGTC ACAGACGGGG CGTAACTTCA TCGCGGTGCG CGACCACGAG ATCGCGGCCC GGGTGATCGG AGTGCCATTA CTGCGCACCA AGCTGCTCGC CTTCGGGGTC TCGTCGTTCC TGATCGGCGT CGCCGGCGTG CTCTGGGCGT TCGCCTATCT GCGGACGGTC GAGCCGGCCG GGTTCAACCT CGATCGCTCG TTCCAGATCC TGTTCATCAT CATCATCGGC GGGCTGGCCT CGCTGCGCGG CGCCTTCATC GGTGCCGCCT TCATCATCGT GTTTCCGCTG CTGCTGTCGC GACTCGGCGC CGCCGTGCTC GGCAGCGTGT TCGATTCCGG CGTGCTGGAG ATGAGCCAGC GCATCGTCAT CGGCGCGCTG ATCATCGCCT TCCTGATCGC CGAGCCGCGC GGCCTGATCG CGCTGGTCGA CCGTGCGGCC AACGTGCTGC GCCGCCTCCG TTCATCCCAG ACCTGA
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Protein sequence | MTTISEAAPT PARSSLLNAN VLGIVLLLVL AYGLVPLIGS DYLMDAVLTP FLALALAAVG LNVLTGYAGQ VSLGSAAFLA VGAYAAYNLN LRLPQLPLLA DIVLAGGIAA AVGIIFGLPS LRLRGFYLAV STLAAQFFVQ WALTKFGWFS NDNASGVIDA PVIRVGSLTF TSATGRYVFS LTIVAVATVL TARLLSSQTG RNFIAVRDHE IAARVIGVPL LRTKLLAFGV SSFLIGVAGV LWAFAYLRTV EPAGFNLDRS FQILFIIIIG GLASLRGAFI GAAFIIVFPL LLSRLGAAVL GSVFDSGVLE MSQRIVIGAL IIAFLIAEPR GLIALVDRAA NVLRRLRSSQ T
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