| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4237 |
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| Symbol | nrd |
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| ID | 5149103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 4452178 |
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| End bp | 4455954 |
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| Gene Length | 3777 bp |
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| Protein Length | 1258 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640559061 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_001240198 |
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| Protein GI | 148255613 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.284316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.211473 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGGCTCG CGATGCGGAT TGAACGGCGC AACACCACCG AAGGACAGTC ACCCTATGCA
GGGATCGACT TCCGCCTGAC CACGTCCGAG ATCAAGAATC CGGACGGCTC GGTGGTGTTC
CGGCTCGAGA ATGTCGAGAT CCCCGAATTC TGGTCGCAGG TCGCCTCCGA CGTGCTGGCG
CAGAAATATT TCCGGAAAGC CGGCGTCGCC GCGCGCCTGA AGAAGGTCGA GGAAGAGAGC
GTGCCGTCCT GGCTGTGGCG CTCGGTGCCC GACACCGACG CGCTGGCCGC CCTCCCCGAG
ACCGAACGCT ACGGCAGCGA GCGCTCCGCC AAGCAGGTGT TCGACCGCCT CGCCGGCTGC
TGGACCTATT GGGGCTGGAA GGGCAACTAC TTCTCGTCGG AAGAGGACGC GGTCGCGTTC
TATGACGAGC TGCGCTTCAT GCTCGCCAAG CAGATGGTCG CGCCGAACTC GCCGCAATGG
TTCAACACCG GCCTGCACTG GGCCTATGGC ATCGATGGCC CCGGCCAGGG CCATTATTAC
GTCGACTACA AGACCGGCAA GCTGACCAAG TCGAAGTCCT CCTACGAGCA TCCGCAGCCG
CATGCCTGCT TCATCCAGGG CGTCGAGGAC GACCTCGTCA ATGACGGCGG CATCATGGAT
TTGTGGGTGC GCGAGGCACG CCTGTTCAAA TATGGCTCCG GCACCGGCTC CAACTTCTCG
AGGCTGCGCG GCGAAGGCGA GAAGCTGTCG GGCGGCGGCC GCTCGTCCGG CCTGATGAGC
TTCCTCAAGA TCGGCGACCG TGCCGCGGGC GCGATCAAGT CGGGCGGCAC CACCCGCCGC
GCCGCCAAGA TGGTGGTGGT CGACGCCGAC CATCCGGACA TCGAGGCCTA TATCGACTGG
AAGGTGAAGG AGGAGCAGAA GGTCGCAGCC CTCGTCACCG GCTCCAAGAT CAACCAGAAG
CACCTCAAGG CCGTGATGAA GGCCTGCGTC AATTGCGAGG GCTCCGGCGA CGACTGCTTC
GACCCCGAGA AGAACCCGGC GCTGCGCCGC GAGATCAAGC TCGCGCGCCG CGCTTTGGTG
CCCGACAACT ACATCAAGCG GGTGATCCAG TTCGCCAAGC AGGGCTATAA GGACATCGAC
TTCCCGATCT ACGACACGGA TTGGGATTCG GAAGCCTATC TGACGGTGTC CGGCCAGAAC
TCCAACAATT CGGTGTCGCT GAAGGACGAC TTCCTGCGCG CGGTCGAGAC CGATGGCGAT
TGGAGCCTGA TCGGCCGCAC CAACAAGAAG GTCGTCAAGA CGCTGAAGGC CAGGGACCTC
TGGGAGAAGA TCGGCCACGC CGCCTGGGCC TCGGCCGATC CCGGCCTGCA CTTCAACACG
ACGATGAACG ACTGGCACAC CTGCAAGGCG TCCGGCGACA TCCGCGCGTC CAATCCGTGC
TCGGAATACA TGTTCCTGGA CGACACCGCG TGCAATCTGG CCTCGGCCAA TCTGCTGACC
TTCTACAACA CCGAGACCAA GCATTTCGAC GTCGGCGCCT ATGAGCATCT CTGCCGGCTC
TGGACCGTCG TGCTCGAGAT CTCCGTGCTG ATGGCGCAGT TCCCGTCGAA GGCGATCGCC
GAGCTGTCCT ACGAGTTCCG CACGCTCGGC CTCGGCTATG CCAATATCGG CGGCCTGTTG
ATGACCATGG GCCTGTCCTA TGACTCGAAG GAGGGCCGCG CGCTGTGCGG TGCCCTGTCG
GCGATCATGA CCGGCATTGC CTACAAGACC TCCGCCGAGA TGGCCGGCGA GCTCGGCCCC
TTCCCCGGCT ACAAGAAGAA CGCCGCGCAT ATGCTGCGCG TCATCCGCAA CCACCGCCGT
GCCGCCAAGG GCGAAGCGAC CGGCTATGAG GCGCTGTCGG TCAACCCGGT GCCGCTCGAT
CACGCTCATT GCCCGCAGGT CTCGCTGGTC AGCCACGCCA TCCAGGCCTG GGACGACGCG
CTGGCGCTCG GTGAGGTCAA TGGCTATCGC AACGCCCAGG TCACCGTGGT CGCCCCCACC
GGCACGATCG GCCTGGTGAT GGATTGCGAC ACCACCGGCA TCGAGCCTGA TTTCGCGCTG
GTGAAGTTCA AGAAGCTGGC CGGCGGCGGC TACTTCAAGA TCATCAACCG CGCGGTGCCC
GCGGCGCTGC GCGTGCTCGG CTATCGCGAG AGCGAGATCG CCGAGATCGA GGCCTATGCG
GTCGGTCACG GCTCGCTGTC GAACGCCCCC GGCGTCAACG CCACGACCTT GAAGGCCAAG
GGTTTCACCG ACGAGGCCAT CGCCAAGGTC GAGAAGGCGC TGCCAACCGC CTTCGACATC
AAGTTCGTGT TCAACAAGTG GACGCTGGGC GAGGACTTCA TCGTCAAGCA GCTCGGCGTC
TCCGCGGACG CGATCGCCGC CCCGAATTTC GAGCTGCTGT CGGCCATCGG CTTCACCAAG
CGCGAGATCG AGGCCGCCAA CGTGCACATC TGCGGCGCTA TGACGGTCGA GGGCGCCCCG
CATCTGAAGG CCGAGCATTA TGCGGTGTTC GATTGCGCCA ATCCCTGCGG CAAGATCGGC
AAGCGCTACC TCTCGGTCGA GAGCCACATC CGCATGATGG CGGCGGCGCA GCCGTTCATC
TCGGGCGCGA TCTCCAAGAC CATCAACATG CCGAACGACG CCACGGTCGA GGACTGCAAG
GCGGCGTATC TGCTCTCATG GAAGCTCGCG CTGAAGGCCA ACGCGCTCTA CCGCGACGGC
TCGAAACTGT CGCAGCCGCT CAACTCGCAG CTCATCGCTG ACGACGAGGA CGAGGACGAT
GCGGTCGAGT CCTTCTACGA GAAGCCGATG GCCGCGCGCG CCACGCAGGT CTCGGAGAAG
ATCGTCGAGA AGCTGGTCGA GCGCATCGTG GTGATGCGCG AGCGCGAGAA GATGCCGGAT
CGCCGCAAGG GCTACACCCA GAAGGCGGTC GTCGGCGGCC ACAAGGTGTA CTTGCGCACC
GGCGAGTATG ATGACGGCCG CCTCGGCGAG ATCTTCATCG ACATGCACAA GGAGGGCGCG
GCGCTGCGCT CCTTCATCAA CAACTTCGCC ATCGCGGTGT CGCTGGGTCT CCAGTACGGC
GTGCCGCTGG AGGAGTATGT CGACGCCTTC ACCTTCACCC GCTTCGAGCC GGCCGGCCCC
GTCCAGGGCA ACGACTCGAT CAAATACGCG ACGTCGATCC TCGACTACGT GTTCCGCGAG
CTCGCCGTCA GCTACATGTC GCGCTTCGAC CTCGCCCATG TCGACCCGTC CGAAAGCAAT
TTCGACGCGC TCGGCCGCGG CGTCGACGAA GGCAAGCCAT CGGAGGACGG CCCGAGCCAG
CAGGCCGCGA AATACGTCTC GCGCGGCCTG ACCCGCTCCC GCACCGACAA CCTCGTGGTG
ATGCGTGGCG GCTCCTCGTC GAGCACGGCG GCGGTCTCCG CTCCGCATGA TGGCGCCCCG
TCGGGCCGTG TCACCGCCCT CTCCGGCTCC CGTGCCGGCG ACGCCATCGA AGGCGCCGTC
GCCCTGAAGC AGGAAGCCCA ACACGACCTC TCGCCCACCG AGAAGCTCGA AGCCCTGCAA
TGGAGCAAGG CCGGCACGGC CGCGACGCAA GTCGCCTCCA AGGCCGAACG CCGCGCCGAA
GCCAAGGCCA AGGGCTACGA AGGCGAGATG TGCTCGGAGT GCGGGAACTT CACGCTGGTG
CGGAACGGGA CGTGCATGAA GTGCGATACG TGCGGAAGCA CGACGGGGTG TTCGTAG
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| Protein sequence | MGLAMRIERR NTTEGQSPYA GIDFRLTTSE IKNPDGSVVF RLENVEIPEF WSQVASDVLA
QKYFRKAGVA ARLKKVEEES VPSWLWRSVP DTDALAALPE TERYGSERSA KQVFDRLAGC
WTYWGWKGNY FSSEEDAVAF YDELRFMLAK QMVAPNSPQW FNTGLHWAYG IDGPGQGHYY
VDYKTGKLTK SKSSYEHPQP HACFIQGVED DLVNDGGIMD LWVREARLFK YGSGTGSNFS
RLRGEGEKLS GGGRSSGLMS FLKIGDRAAG AIKSGGTTRR AAKMVVVDAD HPDIEAYIDW
KVKEEQKVAA LVTGSKINQK HLKAVMKACV NCEGSGDDCF DPEKNPALRR EIKLARRALV
PDNYIKRVIQ FAKQGYKDID FPIYDTDWDS EAYLTVSGQN SNNSVSLKDD FLRAVETDGD
WSLIGRTNKK VVKTLKARDL WEKIGHAAWA SADPGLHFNT TMNDWHTCKA SGDIRASNPC
SEYMFLDDTA CNLASANLLT FYNTETKHFD VGAYEHLCRL WTVVLEISVL MAQFPSKAIA
ELSYEFRTLG LGYANIGGLL MTMGLSYDSK EGRALCGALS AIMTGIAYKT SAEMAGELGP
FPGYKKNAAH MLRVIRNHRR AAKGEATGYE ALSVNPVPLD HAHCPQVSLV SHAIQAWDDA
LALGEVNGYR NAQVTVVAPT GTIGLVMDCD TTGIEPDFAL VKFKKLAGGG YFKIINRAVP
AALRVLGYRE SEIAEIEAYA VGHGSLSNAP GVNATTLKAK GFTDEAIAKV EKALPTAFDI
KFVFNKWTLG EDFIVKQLGV SADAIAAPNF ELLSAIGFTK REIEAANVHI CGAMTVEGAP
HLKAEHYAVF DCANPCGKIG KRYLSVESHI RMMAAAQPFI SGAISKTINM PNDATVEDCK
AAYLLSWKLA LKANALYRDG SKLSQPLNSQ LIADDEDEDD AVESFYEKPM AARATQVSEK
IVEKLVERIV VMREREKMPD RRKGYTQKAV VGGHKVYLRT GEYDDGRLGE IFIDMHKEGA
ALRSFINNFA IAVSLGLQYG VPLEEYVDAF TFTRFEPAGP VQGNDSIKYA TSILDYVFRE
LAVSYMSRFD LAHVDPSESN FDALGRGVDE GKPSEDGPSQ QAAKYVSRGL TRSRTDNLVV
MRGGSSSSTA AVSAPHDGAP SGRVTALSGS RAGDAIEGAV ALKQEAQHDL SPTEKLEALQ
WSKAGTAATQ VASKAERRAE AKAKGYEGEM CSECGNFTLV RNGTCMKCDT CGSTTGCS
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