Gene BBta_4230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4230 
Symbol 
ID5149006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4443176 
End bp4443874 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content68% 
IMG OID640559055 
Producthypothetical protein 
Protein accessionYP_001240192 
Protein GI148255607 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAC CGCTTTCCAT TGCCTTTGTC CTCTTCCCGC ATGTGACGCA GCTCGATCTC 
ACCGGTCCCG TGCAGGTGTT CTCCAGCGTG CCCGGCGCGA CGCTGCATCT GGCCTGGAAA
ACGATCGCGC CAGTGCCCAC CGATTCCGTG CTCACGCTGC TGCCGACGAC GACCTTCGCG
GACTGTCCGC AGAGCGATAT CATCTGCATC CCCGGCGGCT TCGGCGTGGA CGCCATTCTC
AACGACGACG AGGTGATCGG CTTCATTCGC CGCCAGGCCG CCGGCGCCAG CTACATCACC
TCGGTATGCA CCGGCTCGCT GGCGCTTGGC GCCGCCGGCC TGCTCGACGG CTATCGCGCC
GCGACCCATT GGAGCGCGCG CGAGTGCCTC GCATTGTTCG GAGCCACGGT CAGCACCGAG
CGGGTGTGCA TCGATCGCAA CCGCATCACC GGCGGCGGCG TCACCGCCGG CATCGATTTC
GCGCTGACGG TCGTGTCGCA ACTGCTCGAC CGGCCGACGG CCGAAGCCAT CCAACTCCGG
CTCGAATACA ATCCAGCGCC GCCCTTCACG GCTGGTTCGC CGGACACGGC GCCACCCGAG
GTGCTGTCAC GGATGCTTGA ACGGATCGCT CCATTCCGGA CGCGTCGCGT CGAGGCAGCC
GAACGCGCAG CCAGCCGGCT CGCGAGGACC GCAGGCTAG
 
Protein sequence
MAEPLSIAFV LFPHVTQLDL TGPVQVFSSV PGATLHLAWK TIAPVPTDSV LTLLPTTTFA 
DCPQSDIICI PGGFGVDAIL NDDEVIGFIR RQAAGASYIT SVCTGSLALG AAGLLDGYRA
ATHWSARECL ALFGATVSTE RVCIDRNRIT GGGVTAGIDF ALTVVSQLLD RPTAEAIQLR
LEYNPAPPFT AGSPDTAPPE VLSRMLERIA PFRTRRVEAA ERAASRLART AG