Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4230 |
Symbol | |
ID | 5149006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 4443176 |
End bp | 4443874 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640559055 |
Product | hypothetical protein |
Protein accession | YP_001240192 |
Protein GI | 148255607 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAAC CGCTTTCCAT TGCCTTTGTC CTCTTCCCGC ATGTGACGCA GCTCGATCTC ACCGGTCCCG TGCAGGTGTT CTCCAGCGTG CCCGGCGCGA CGCTGCATCT GGCCTGGAAA ACGATCGCGC CAGTGCCCAC CGATTCCGTG CTCACGCTGC TGCCGACGAC GACCTTCGCG GACTGTCCGC AGAGCGATAT CATCTGCATC CCCGGCGGCT TCGGCGTGGA CGCCATTCTC AACGACGACG AGGTGATCGG CTTCATTCGC CGCCAGGCCG CCGGCGCCAG CTACATCACC TCGGTATGCA CCGGCTCGCT GGCGCTTGGC GCCGCCGGCC TGCTCGACGG CTATCGCGCC GCGACCCATT GGAGCGCGCG CGAGTGCCTC GCATTGTTCG GAGCCACGGT CAGCACCGAG CGGGTGTGCA TCGATCGCAA CCGCATCACC GGCGGCGGCG TCACCGCCGG CATCGATTTC GCGCTGACGG TCGTGTCGCA ACTGCTCGAC CGGCCGACGG CCGAAGCCAT CCAACTCCGG CTCGAATACA ATCCAGCGCC GCCCTTCACG GCTGGTTCGC CGGACACGGC GCCACCCGAG GTGCTGTCAC GGATGCTTGA ACGGATCGCT CCATTCCGGA CGCGTCGCGT CGAGGCAGCC GAACGCGCAG CCAGCCGGCT CGCGAGGACC GCAGGCTAG
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Protein sequence | MAEPLSIAFV LFPHVTQLDL TGPVQVFSSV PGATLHLAWK TIAPVPTDSV LTLLPTTTFA DCPQSDIICI PGGFGVDAIL NDDEVIGFIR RQAAGASYIT SVCTGSLALG AAGLLDGYRA ATHWSARECL ALFGATVSTE RVCIDRNRIT GGGVTAGIDF ALTVVSQLLD RPTAEAIQLR LEYNPAPPFT AGSPDTAPPE VLSRMLERIA PFRTRRVEAA ERAASRLART AG
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