Gene BBta_4229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4229 
Symbol 
ID5149005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4442126 
End bp4443064 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content69% 
IMG OID640559054 
Producttranscriptional regulator 
Protein accessionYP_001240191 
Protein GI148255606 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGCG TCCTGATCTT TCCGAATTTC CAGTTGCTCG ATGCCGCCGG GCCGATCTCG 
GTGTTCGAGA TCGCCGCGCG CTATGCGCGC GTTGTCCCGG CGCTCCGGGT GATGGCGGCG
GAGCCGGGGC CGGTGCGCTC CTCGTCGGGC GCCGAGATGC TGGCGCGCAA GTTCGGCCCG
GCGTCGGCGC TCTCGACATT GCTGATTGCC GGCGGCGACG GCGTGGAGGC GGCGAGCCGC
AGTTCCTGCA CGATCAACTT CGTCCGGAAG GTCGCGCAAC GCGGCACCCG CATCGCGAGC
GTCTGTTCCG GAGCGTTCGT GCTGGCCGAA GCGGGCCTGC TCGACGGCCG GCGCGCCACC
ACGCATTGGC AGCGAACGCG GCAGTTCCTG CGCAGCTATC CGAATGTAAG GCTGGAGCCG
GACAGCATCT ATGTTCGCGA CGGCCAGGTG TGGAGCTCGG CCGGGATCAC GGCGGGCATC
GACCTCGCGC TGGCGATGGT GGCCGAGGAT CATGGCGAGG AGATCGCCCA GAAGACGGCA
CGTCAGCTCG TGCTGTATCA TCGCCGCAGC GGCGGCCAAT CGCAATTCTC CTCGCTGCTC
GAACTGAAAG CGCCGAGCGG CCGCTTCGCC GATCTCCTGA CCTGGGCACG CGAGCATCTC
GATGCGCCCC TGACCGTCGA TGATCTCGCC GAGCGTGCCG GCATGAGCAC ACGGCATTTC
ACCCGCGCCT TCGTCGCCGA GACCGGCACC ACGCCCTCCA AGGCGATCGA ACGCCTGCGT
CTCGAGGTCG CGCGCGATCG CGTTCAGGCC TCGCACCAGC CGATCGAACG GGTCGCCGAA
GCCACGGGCT TTCGCGATCC CGAGCGGATG CGCCGGGCGT TCATTCGCGC TTTCGGCCAG
CCGCCGCAGG CGTTGCGGCG GGCGGCGAGG GCGGGATAG
 
Protein sequence
MIGVLIFPNF QLLDAAGPIS VFEIAARYAR VVPALRVMAA EPGPVRSSSG AEMLARKFGP 
ASALSTLLIA GGDGVEAASR SSCTINFVRK VAQRGTRIAS VCSGAFVLAE AGLLDGRRAT
THWQRTRQFL RSYPNVRLEP DSIYVRDGQV WSSAGITAGI DLALAMVAED HGEEIAQKTA
RQLVLYHRRS GGQSQFSSLL ELKAPSGRFA DLLTWAREHL DAPLTVDDLA ERAGMSTRHF
TRAFVAETGT TPSKAIERLR LEVARDRVQA SHQPIERVAE ATGFRDPERM RRAFIRAFGQ
PPQALRRAAR AG