Gene BBta_4224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4224 
Symbol 
ID5149143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4437524 
End bp4438690 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content68% 
IMG OID640559049 
Productaromatic amino acid aminotransferase 
Protein accessionYP_001240186 
Protein GI148255601 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1448] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.815912 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAAC GCCTGAGCCG CCAGCCCGAC GATCCCCTGC TCGCTTTGAT CGGCATCTTC 
AAAGCCGATC CGCGGGCCGA CAAGGTCGAT CTCGGCGTCG GCGTCTATCG CGACGAAGCC
GGCCATTCCC CGATCTTCCG CGCCGTGAAG GCCGCCGAGC GGCTGATCTG GGAAAGCCAG
AGCAGCAAGG CCTATGTGGC GCCGGAAGGC GACCAGACCT ACCTCGACCT GCTCTGGACC
ATGGTCGGCG GCACCGCCTC GCCGGTGCAT GCTGCCGGCG TGCAGACCCC CGGCGGCTCC
GGCGCATTGC GGCTGGCTGC CGATCTGATC CGCCAGGCCG GCACCGGCAA GATCTGGCTT
GGACTGCCGA GCTGGCCGAA CCATGCCGGC ATTTTCGCCG CCGCCGGGCT CAAGATCGAA
ACCTATCCCT ATTTCGACGT CCCGTCGCAG AGCTTGCAGC TCGACAGCAT GATCGAGGCG
CTCCAGCGCG CCGAGCCCGG CGATGCGGTC CTGCTGCATG CGTCCTGCCA CAATCCGACA
GGGGCCCCGC TCGGCGCCGA GGATTGGGCG CGCGTCACCG CCGTGATCGC CGCGCGGGGT
CTCGTGCCGC TGATCGATTC CGCCTATCAG GGTTTCGGCG CCGGCTTCGA CGGCGACGTC
GCCGGCTTGC GGGCGATGAT CGCAGCCATC CCCGAAGCGC TCATCGCGGT GTCCTGCTCG
AAATCCTTCG GTCTCTATCG TGAGCGCACC GGCGCGCTCT ACGCCGTCGC TGCCGCACAG
GCCGCAGCCG ATACCGCGCG CTCCAACCTC GTCGCCATCG CCCGCACCAG CTATTCGATG
CCGCCGGACC ATGGTTCGGC CATCGTGAAG ACGATCCTGG GCACGCCGGA CCTCTACGAC
GACTGGCGCA GCGAGCTCGA CTCCATGCGG CAACGTCTGG CCACGCTGCG ACGCGCATTC
GCCGACGCGC TGGGCGACCG CTGGTCGAAC TCCCTGGCCA TCGGCCGGCA GGAAGGCATG
TTCTCGTTGC TGCCAGTGAC GCCGGCTGAC GTCATGGCCC TTCGCGAGAA GCACGGCGTC
TACATGCCGA CCTCCGGCCG GATCAACATC GCCGGCCTGA AGCTTGCGGA CGTGGCGCGC
GTCGCCGGAC TGTTCAAGGC GCTCTGA
 
Protein sequence
MFERLSRQPD DPLLALIGIF KADPRADKVD LGVGVYRDEA GHSPIFRAVK AAERLIWESQ 
SSKAYVAPEG DQTYLDLLWT MVGGTASPVH AAGVQTPGGS GALRLAADLI RQAGTGKIWL
GLPSWPNHAG IFAAAGLKIE TYPYFDVPSQ SLQLDSMIEA LQRAEPGDAV LLHASCHNPT
GAPLGAEDWA RVTAVIAARG LVPLIDSAYQ GFGAGFDGDV AGLRAMIAAI PEALIAVSCS
KSFGLYRERT GALYAVAAAQ AAADTARSNL VAIARTSYSM PPDHGSAIVK TILGTPDLYD
DWRSELDSMR QRLATLRRAF ADALGDRWSN SLAIGRQEGM FSLLPVTPAD VMALREKHGV
YMPTSGRINI AGLKLADVAR VAGLFKAL