| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4214 |
|---|
| Symbol | aroQ |
|---|
| ID | 5148894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 4427909 |
|---|
| End bp | 4428400 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640559039 |
|---|
| Product | 3-dehydroquinate dehydratase |
|---|
| Protein accession | YP_001240176 |
|---|
| Protein GI | 148255591 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0757] 3-dehydroquinate dehydratase II |
|---|
| TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.392467 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACG ACCCGCACAA GACAATTTAC GTCCTCAATG GACCCAACCT CAATCTGCTG
GGCACCCGCG AGCCGGAGAC CTACGGCCAC GCGACACTGG CCGATGTCGA GCGTCTGTGC
GTGGAAACGG CGACGCGGTT CGGACTGGTG GCCGAGTGCC GTCAGTCGAA CCACGAAGGC
GTACTGGTGG ATTGCGTCCA TGAGGCCCGC GTCAAGGGCG TGGCCGGCAT CATTCTCAAC
GCCGGCGCGT ATTCCCATAC CTCGATTGCT CTGCATGACG CGCTCATGGG CGTGAAGATC
CCGACGGTCG AGGTGCATAT CAGCAACATC CACGCCCGCG AGAGCTTCAG GCACCATTCT
TTCACGGCCA AGGCCGCGTT TGCGTCAATT TGTGGCTTTG GAATCGACGG CTACCGACTC
GCGATCACTG GCCTGGCTGC AAAGATTGGT GCCACGACCG ACACGAAGAC CGACATCACG
GCGCAAGCCT GA
|
|---|
| Protein sequence | MADDPHKTIY VLNGPNLNLL GTREPETYGH ATLADVERLC VETATRFGLV AECRQSNHEG
VLVDCVHEAR VKGVAGIILN AGAYSHTSIA LHDALMGVKI PTVEVHISNI HARESFRHHS
FTAKAAFASI CGFGIDGYRL AITGLAAKIG ATTDTKTDIT AQA
|
|---|
| |