| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4204 |
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| Symbol | |
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| ID | 5148775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 4414850 |
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| End bp | 4418062 |
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| Gene Length | 3213 bp |
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| Protein Length | 1070 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640559030 |
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| Product | ribonuclease E |
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| Protein accession | YP_001240167 |
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| Protein GI | 148255582 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAACA AGATGTTGAT CGATGCTACC CACCCGGAAG AGACCCGGGT CGTTGTCGTC
CGCGGCAACC GCGTCGAGGA ATTTGATTTT GAAACTGCCC AGCGCAAGCA ACTCCGCGGC
AACATCTACC TCGCCAAGGT CACCCGGGTA GAGCCGTCGC TCCAGGCGGC CTTCGTTGAA
TATGGCGGCA ATCGCCACGG CTTCCTGGCG TTCAGCGAAA TCCACCCTGA TTATTACCAG
ATCCCGGTCG CCGATCGTCA GGCGCTGATC GAGGCGGAAG AGCGCGCCCA CCGCGAGGCC
GAGGAAGAGA GCGAGAACCG GTCCAATCGC CGGCGCAACC GGCACCGCAG CTCGCGGCGC
CGCGGCAGCG GCGAGCGCGT TCAGAGCGAG ATCATCGAGG CCGCCGACGC CAGCCAGGCG
CCTCACGGCG AGACGCATGA GGGCGATCAC GGCGCATTCG AGGCGCCGGA CGCCGCCTAC
GCGCAGGACA ACCACCCCGC CGATGATGCG GGCGCGGAGA CCCCTGCACA GACAGCAGGC
TTCGCCGAGG CGCCGCTTGA GGCTCCAACG CACGCCGCCC ATGACGAAGG GACCCACGAC
GCGCAGCCGC ATCACGGTTC GGATGCGCCG GCGGTTGCGG ATTCCGAGCC CGCGCAGGGC
GGCACCGACC TCCCGGTGTC CCCTTCTGCG GTCGCAGCGG CCGCGTCGAG CGGCGAGGTT
GCCTCGTCCG AGGCCGACGA CGCCGCCGAG GCGCACGATC ACGACCACCA CGATCACGAC
CATCACGATC ACGATCACGA TGACCATCAC GACGATGATC ATCACGAGGA TCATGACGAG
CATGGGCATG AGGACTCCGC CGATCTCTCG CCCGTCGCCG AGCACGATGA TGATGGCGAG
GTCACGATCG TTCCGGGCGA CGACAATGGT GTCGAGCCGG CCGTCGCGGA TCACGACGAC
GACGACGAGG ACGGCGAGGA GATCGAGGAA GAGGTCGTCG AATCCGTCGG CGGCGACGAC
GTGCTCGAGG AAGTGCCCGA GCGCACCTTC CGTCCGCGTC GCCAGTACAA GATCCAGGAG
GTCATCAAGC GCCGCCAGGT GATGCTGGTG CAGGTCGTCA AGGAAGAGCG CGGCAACAAG
GGCGCCGCGC TGACGACCTA TCTGTCGCTC GCCGGCCGCT ATGCCGTGCT GATGCCGAAC
ACCGCGCGTG GCGGCGGCAT CAGCCGCAAG ATCACCTCGG CGCAGGACCG CTCGCGCCTG
AAGGAAGTGG TGCAGGACCT CGACGTGCCC GAGGGCATGG GCGTCATCCT GCGCACCGCC
GGCGCCAACC GCACCAAGCC CGAGATCAAG CGCGACTTCG AATATTTGCT GCGGCTGTGG
GAAACGGTCC GCGACATGAC CTTGAAGTCG CAGGCCCCCA CCCTCGTCTA CGAGGAAGGT
TCGCTGATCA AGCGCTCGCT GCGCGACCTC TACAACAAGG AGATCGATGA GATCCTGGTT
GCCGGCGAAG CCGGCTACCG TGAGGCGCAC GACTTCATGA AGATGCTGAT GCCGACCAAC
GTCCGGGCGG TGAAGCAGTA TCGCGATGGC CAGCCGCTGT TTTCGCGGAT GGGTGTCGAG
AGTCAGCTCG ATGCGATGTT CTCGCCGACC GTGCAGCTGC GTTCGGGCGG CTACATCGTG
ATCAATCAGA CCGAGGCGCT CGTCTCGATC GACGTGAACT CCGGCCGCGC CACCCGCGAG
CATCACATCG AGGACACCGC GCTCAAGACC AATATGGAAG CAGCCGAGGA AGTGGCGCGG
CAGCTCCGGC TGCGCGACCT CGCCGGGCTG ATCGTCATCG ACTTCATCGA CATGGACGAG
AAGCGCAACA ACCGCTCCGT CGAGCGCAAG CTGTCGGACT GTCTGCGGCA GGATCGCGCG
CGCATCCAGG TCGGCCGCAT CTCGCATTTC GGCCTGCTGG AGATGTCGCG CCAGCGCATC
CGCGCCAGCG TGCTGGAGAG CTCGACCGAG CCCTGCGCGC ATTGCGGCGG CACCGGCCAT
GTGCGCTCGG TGTCCTCGGT GGCGCTGCAG CTGTTGCGCA GCCTCGAAGA GACGCTGATG
AAGGGGGCGA CCCACAACCT CGTGGTCCGC ACGCGGACCG AGGTGGCGCT CTACGTGCTC
AATCACAAGC GCGGCCATCT GCGCGACCTC GAGAACAGCT TCAAGGTCTC GCTGGCCGTG
ATCGCCGATC CGAACGTCAG CGGTCAGCAA TCCTTCATCA TCGATCGCGG TGAGCAGGTG
CACACGCTCG AGGCCGCCAA GGCGCTGCTG GCTGCGCAGG CCTCTGCTCC GCCTTTGGTG
GCCGACGAGG TCTATGACGA GGACGAGCCG TTCGACATCG AAACGGAATC CGAGGTCGAA
ACCGAGGAAA CCGAGGGCCT GTCGGAAGAG GCCGCCGAGG CCAGCGAAAC CGAGCGTGAC
GGCGCCCGCC GCAAGCGGCG TCGGCGCCGC CGCGGCCGGG GCGGTAACGA GGCGCGCGAA
GCGACTCCTG AAGGAGCTAC AGCGGCAGAG TCCCTCGAGG TGGGCACCGC GGCCGAACTG
CCGGCCGAGG ATGCCGAGAC AGAGGACGAG GACAGCGACG AGCAGCCGGC CTTCGCGTCA
GGCGACCAGC CGAGCGACCA GGCCAATGGT GAGCGGCGCC CGCGGCGGCG CGGCCGCCGT
GGCGGTCGCC GTCGGCGCGG CGGCATCGAT GACGGTCTGG CCGCATCGAT CAGCGACGAT
CTTGCACCGG CCTCTGCGTC CGAGGCCGAG GCCGCCGTCG CCGATTTCGA CGGCAACGGC
GTCCCCCATG GTGACGAGCC GGAAGCCCCG GTCGAGGCTG CCCCCGCAGC GGAAGTCGCC
TTGGCCGAGC AGCCCGTCGC ACCGGCAGCT CCTGCTGCAA TCCAGCCCGA GACGCAGCCG
GCCGAGCCTG CGAAGGCCGA GCCCGAGAAG ACCCCGCGTC GCTCGACCGT GCGCGAGAAG
GTCAGCTTGT TCACCGAGCC CAAATCCACC GAGCTCAAGC CGGACAGCGC GGTTGTCTCG
GTCAACGTTG CCGAGAGCAC TCCCACCGTG GCTGCTGCGG CGCCGGAGGC GGTAACGACC
GAGCCGACCG CGACCGAGCC CGCTCCGGAG GCCGCGCCCG CGGCCCCCCG CAAGGCCGGC
TGGTGGTCGC GCCGTTTCGG CGGCGGCCAA TAA
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| Protein sequence | MPNKMLIDAT HPEETRVVVV RGNRVEEFDF ETAQRKQLRG NIYLAKVTRV EPSLQAAFVE
YGGNRHGFLA FSEIHPDYYQ IPVADRQALI EAEERAHREA EEESENRSNR RRNRHRSSRR
RGSGERVQSE IIEAADASQA PHGETHEGDH GAFEAPDAAY AQDNHPADDA GAETPAQTAG
FAEAPLEAPT HAAHDEGTHD AQPHHGSDAP AVADSEPAQG GTDLPVSPSA VAAAASSGEV
ASSEADDAAE AHDHDHHDHD HHDHDHDDHH DDDHHEDHDE HGHEDSADLS PVAEHDDDGE
VTIVPGDDNG VEPAVADHDD DDEDGEEIEE EVVESVGGDD VLEEVPERTF RPRRQYKIQE
VIKRRQVMLV QVVKEERGNK GAALTTYLSL AGRYAVLMPN TARGGGISRK ITSAQDRSRL
KEVVQDLDVP EGMGVILRTA GANRTKPEIK RDFEYLLRLW ETVRDMTLKS QAPTLVYEEG
SLIKRSLRDL YNKEIDEILV AGEAGYREAH DFMKMLMPTN VRAVKQYRDG QPLFSRMGVE
SQLDAMFSPT VQLRSGGYIV INQTEALVSI DVNSGRATRE HHIEDTALKT NMEAAEEVAR
QLRLRDLAGL IVIDFIDMDE KRNNRSVERK LSDCLRQDRA RIQVGRISHF GLLEMSRQRI
RASVLESSTE PCAHCGGTGH VRSVSSVALQ LLRSLEETLM KGATHNLVVR TRTEVALYVL
NHKRGHLRDL ENSFKVSLAV IADPNVSGQQ SFIIDRGEQV HTLEAAKALL AAQASAPPLV
ADEVYDEDEP FDIETESEVE TEETEGLSEE AAEASETERD GARRKRRRRR RGRGGNEARE
ATPEGATAAE SLEVGTAAEL PAEDAETEDE DSDEQPAFAS GDQPSDQANG ERRPRRRGRR
GGRRRRGGID DGLAASISDD LAPASASEAE AAVADFDGNG VPHGDEPEAP VEAAPAAEVA
LAEQPVAPAA PAAIQPETQP AEPAKAEPEK TPRRSTVREK VSLFTEPKST ELKPDSAVVS
VNVAESTPTV AAAAPEAVTT EPTATEPAPE AAPAAPRKAG WWSRRFGGGQ
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