| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4197 |
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| Symbol | upp |
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| ID | 5155711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 4406185 |
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| End bp | 4406820 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640559023 |
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| Product | uracil phosphoribosyltransferase |
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| Protein accession | YP_001240160 |
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| Protein GI | 148255575 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0035] Uracil phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0551495 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.563023 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAAGCA GCCACGTCCA CGTCGTCGAT CACCCGCTGG TCCAGCACAA GCTTTCCCTG
ATGCGCGAGC GCGACCGCTC GACCAAGGGC TTCCGTGAGC TGTTGAACGA GATCGGCATG
CTCCTGGCCT ATGAGGTCAC ACGGGACCTG CCGCTCGAAC TGGTCGACAT CGAAACACCG
ATCGCGCCGA TGAAGGCGCC GAAGATCGCG GGCAAGAAGT TGACCCTCGC CCCCATCCTG
CGCGCGGGGG TCGGCTTCCT GGACGGCATG CTGGCGCTGA TGCCATCGGC GCGCATCGCT
CATATCGGGC TCTATCGCGA CCCCACGACG CTCCAGGCGG TCGAATACTA TTTCAAGGCG
CCGCAGGACC TGACCGACCG CACCGTGATC CTGATGGACC CGATGCTGGC GACCGGCAAC
TCGGCCTGCG CCGCGGCCGA ACTGCTCAAG GCGCGCGGTG CCCGGGACAT CCGTTTCGTC
TGCCTGCTGG CCGCGCCGGA AGGCATCGCG CAGTTCGGAA AGGAACATCC GGACATTCCG
ATCTGGACCG CGGCGATCGA CGAGAAGCTG AACGACCACG CCTATATTGT GCCGGGTCTC
GGCGATGCCG GCGACCGCAT GTTCGGCACG AAATGA
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| Protein sequence | MTSSHVHVVD HPLVQHKLSL MRERDRSTKG FRELLNEIGM LLAYEVTRDL PLELVDIETP
IAPMKAPKIA GKKLTLAPIL RAGVGFLDGM LALMPSARIA HIGLYRDPTT LQAVEYYFKA
PQDLTDRTVI LMDPMLATGN SACAAAELLK ARGARDIRFV CLLAAPEGIA QFGKEHPDIP
IWTAAIDEKL NDHAYIVPGL GDAGDRMFGT K
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