| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4166 |
|---|
| Symbol | glmS |
|---|
| ID | 5153412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 4375840 |
|---|
| End bp | 4377666 |
|---|
| Gene Length | 1827 bp |
|---|
| Protein Length | 608 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640558995 |
|---|
| Product | glucosamine--fructose-6-phosphate aminotransferase |
|---|
| Protein accession | YP_001240133 |
|---|
| Protein GI | 148255548 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
|---|
| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGAA TTGTCGGCAT TTTGGGACGC GGGCCGGTCG CCGAGCAGTT GGTGGATTCG
CTCAAGCGGC TCGAATATCG CGGTTATGAC TCGGCCGGCG TCGCCACGCT CGAAGGCGGC
ATCCTGGAGC GACGGCGCGC CGAGGGCAAG CTGAAGAATC TCGAAGCGCG GCTTCAGGCT
CAGCCTCTGA AGGGATTTAC CGGCATCGGT CATACGCGCT GGGCGACGCA TGGCAAGCCG
ACCGAGAACA ATGCGCATCC GCACGCGACG GACCGCGTCG CCGTCGTCCA CAACGGCATC
ATCGAGAATT TCCACGAATT GCGTGAAGCC CTGCAGAAGA AGGGCACGGT GTTCGCGACC
GAGACCGACA CCGAGATCGT GGTGCATCTG GTCGATGATC TCTTGAGCCA GGGCATGGCT
CCGGTCGACG CCGTGCGCGA GACGCTTGCG AAACTGCGGG GCGCCTTCGC GCTCGGCTTC
ATCTTCGCGG GTCAGGACGA TCTTCTGATC GGCGCGCGCA ATGGTCCGCC GCTCGCGGTC
GGATATGGCA ATGGTGAGAT GTATCTGGGG TCGGACGCGA TCGCGCTCGG ACCGCTCACC
GACAACATCA GCTATCTCGA GGATGGCGAC TGGGTGGTGC TGACCCACAA GGGCGCCACG
GTCTACGATC GCAAAAACGC GGTCGCCGAT CGCGAGATCG TCAAGCATGG TCCATCGACG
TCGCTGGTCG ACAAGGCCAA CTACCGCCAC TTCATGGCCA AGGAGATCCA CGAGCAGCCG
GAGGTCGTCG GCCATACCCT GGCGCGCTAT GTCGACATGG GCACCGAGCG CGTGATGCTG
CCGGCGCGGC TGCCGTTCGA CTTCAAGGAC ATTCAGCGCA TCTCGATCAC CGCTTGCGGC
ACCGCGAGCT ATGCCGGTTT CGTCGCCAAA TACTGGTTTG AGCGCTTCGC GCGGGTGCCG
GTCGAGCTCG ACGTCGCCTC CGAGTTCCGC TACCGCGAGG CGCCGCTGCG CAAGGGCGAC
CTCGCCATCT TCATCTCGCA ATCGGGTGAG ACGGCCGACA CGCTCGCCGC GCTGCGCTAC
GCCAAGGCCC AGGGTGTTCA CACCCTGTCC GTTGTCAACG TGCCGACCTC GACGATTGCG
CGCGAGAGCG AAATCGTGAT GCCGACCCTG GCGGGCCCCG AGATCGGCGT CGCGTCGACC
AAGGCCTTCA CCTGCCAGCT GATGGTGCTG GCCGCGCTGG CGATTGCCGC GGGCCGGGGC
CGTGGCGAAT TGTCCGAAGC CGACGAGACA AAGCTGGTGC ATGGCCTCGT CGAGGTGCCG
CGCCTGATCG CGGCGGCCCT CACCACCGAG CCGCAGATCG AGAAGCTCGC CCGCGAGATC
GCCAAGTCGA AAGACGTGCT CTATCTCGGC CGCGGCACCT CCTATCCGCT GGCGCTGGAA
GGCGCGCTGA AGCTGAAGGA GATTTCCTAT ATCCACGCCG AAGGCTACGC CGCCGGCGAG
CTGAAGCATG GTCCGATCGC GCTGATCGAC GAGACCATGC CGGTTGTCGT CATTGCGCCG
TATGACCGCG TGTTCGAGAA AACCGTATCC AACATGCAGG AGGTCGCGGC GCGCGGCGGC
AACATCATCC TGATGACCGA TGCCAAGGGG GCCGAAGAGG CCACCGTGGA CTCGCTGGTC
ACGATCATCT TGCCCGACAT GGCTGCGACG TTCACGCCGA TCGTCTACGC CATCCCGGTG
CAGCTGCTGG CCTATCATAC GGCCGTGGTG ATGGGGACAG ACGTCGACCA GCCGCGCAAC
CTCGCCAAAT CGGTCACGGT GGAATAG
|
|---|
| Protein sequence | MCGIVGILGR GPVAEQLVDS LKRLEYRGYD SAGVATLEGG ILERRRAEGK LKNLEARLQA
QPLKGFTGIG HTRWATHGKP TENNAHPHAT DRVAVVHNGI IENFHELREA LQKKGTVFAT
ETDTEIVVHL VDDLLSQGMA PVDAVRETLA KLRGAFALGF IFAGQDDLLI GARNGPPLAV
GYGNGEMYLG SDAIALGPLT DNISYLEDGD WVVLTHKGAT VYDRKNAVAD REIVKHGPST
SLVDKANYRH FMAKEIHEQP EVVGHTLARY VDMGTERVML PARLPFDFKD IQRISITACG
TASYAGFVAK YWFERFARVP VELDVASEFR YREAPLRKGD LAIFISQSGE TADTLAALRY
AKAQGVHTLS VVNVPTSTIA RESEIVMPTL AGPEIGVAST KAFTCQLMVL AALAIAAGRG
RGELSEADET KLVHGLVEVP RLIAAALTTE PQIEKLAREI AKSKDVLYLG RGTSYPLALE
GALKLKEISY IHAEGYAAGE LKHGPIALID ETMPVVVIAP YDRVFEKTVS NMQEVAARGG
NIILMTDAKG AEEATVDSLV TIILPDMAAT FTPIVYAIPV QLLAYHTAVV MGTDVDQPRN
LAKSVTVE
|
|---|
| |