| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4137 |
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| Symbol | nirA |
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| ID | 5152343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4342898 |
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| End bp | 4344712 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640558967 |
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| Product | ferredoxin-nitrite reductase |
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| Protein accession | YP_001240105 |
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| Protein GI | 148255520 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
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| TIGRFAM ID | [TIGR02435] precorrin-3B synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.298676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.314956 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGCTG GAGCTTCGTC CGCCATCATG AAAATCGAAC CCTTGTCAGT CGGCTTCAAC
GACGAGCAGA AGCGCTATCT CGAAGGCCTG GCCGCCGGCC TCAAAGTCAA CCTGGCGGGC
CGGGCTCAGA CTGCCACCGC CCCCCTTGCG GAGCCGAGCG GGCCTGATGC CATCCATATC
AAGGCGCAGG ACAAGGTCCT CGCAGCGGGT CGCAAGCTCG CCGACCAGGA GAAGGTCAAG
CGCGAGCAGC ATCCGTTCGA TGCCTATCCG CGCTTGAAGC AGCAGGCCCA CAGCAACGCA
GCGCCGTCTG CGGCCGACAA TTTCCGCTGG CGCTATTTCG GCCTGTTTCA TGTCGCGCCG
GCGCAGGATT CCTACATGTG CCGGCTACGG ATTCCGAACG GCATCCTGAA GCATTGGCAG
CTCACGGGGC TAGCCGACCT CGCCGATCAG CTCTGCGGTT CGTACAGCCA CGTGACCACG
CGGGCCAATC TGCAACTGCG CGAAATCCCG CCCAAGCACG CCGTCATGCT GCTGGAGGGC
CTGTCCGATC TCGGGCTGAC TGCGCGCGGT TCCGGCGCCG ACAACATCCG CAATGTGACG
GGCACGCCGA CCGCCGGCAT CGATCCGCAG GAATTGCTCG ATACCCGCGC CTATGCGCGC
GAATGGCATT TTCACATCCT CAACGACCGC TCGCTGTACG GACTGCCGCG CAAATTCAAC
GTCGCGTTCG ACGGCGCCGG CCGGATCGCG GCGCTCGAAG ACACCAATGA CATCGCGTTC
TCCGCCGTCG AGGTGAAGGA TGGCTTCGGC GTCGCGCCGG GCGTCTGGTT CAGGCTCGGC
CTCGGCGGCA TCACCGGTCA CAAGGATTTC GCCAAGTCCA CCGGGATCAT CGTCGAGCCC
GAGCGCGCCA CCGAAGTGGC CGATGCCATC GTGCGGCTCT TCATCGAGAC CGGCGATCGC
ACCAATCGCC TGAAGGCGCG GCTCAAATAT GTGCTCGACA GCATGGGCCA TGACAAATTC
ATGGAAGCTG TCGAGTCGCG GCTCGGCCGC AAGCTTGCGC GCGTCGCGGA CGAGGCGATC
AAGCCGCGGC CCGAAGCCGA TCGCATGGCC CATATCGGCG TGCACCCGCA GAAGCAGCAA
GGCCTGAACT GGATCGGCGT CGTGCTGCCG CTGGGCAAGC TGACGACGGA CCAGATGCGC
GCGCTCGCCA GGATCGCTGC GGATCTCGGT GACGGCGAGA TCCGGCTCAC GGTCTGGCAG
AACCTGCTGC TACCGGGCGT GCGCGACGAG AACGTCGCCA TGGCCTGTGC CGCGATCGAG
CAGATCGGTC TCTCGACCAA GGCGTCGCAC ATCCGCGCCG GACTGATCGC CTGCACCGGC
AATTCCGGTT GCAAGTTCGC CGCCAGCAAC ACCAAGCGTC ACGCCGCCGA GATTGGTGAC
TGGTGCGAGA GCAGGGTGGA GGTCGATACC CCGCTGAACA TCCATCTCAC CGGCTGCCAT
CACTCCTGCG CCCAGCACTA CATCAGCGAC ATCGGCATGA TCGGAGCGAA GGTCCCAGTC
GGCGATGGCG ACGAGACGGT CGAGGGCTAT CACCTGTTCG CCGGCGGCGG CTTCGGCCCG
CAGGCCGACA TTGGCCGCGA AGTCTATCGC GACCTCAAGG CGGAGGACGC GCCGCGCACC
GTCGAGAAGC TGCTCAAGGC CTATCTGGCG CACCGCCTCT CTCCCGATGA AACCTTCCTG
TCCTTTGCCC GCCGGCACGA TGGCGAAACC CTGCGCAAGC TCGCCGACGC GCAGACGTCC
GAGGTGGCCG CATGA
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| Protein sequence | MAAGASSAIM KIEPLSVGFN DEQKRYLEGL AAGLKVNLAG RAQTATAPLA EPSGPDAIHI
KAQDKVLAAG RKLADQEKVK REQHPFDAYP RLKQQAHSNA APSAADNFRW RYFGLFHVAP
AQDSYMCRLR IPNGILKHWQ LTGLADLADQ LCGSYSHVTT RANLQLREIP PKHAVMLLEG
LSDLGLTARG SGADNIRNVT GTPTAGIDPQ ELLDTRAYAR EWHFHILNDR SLYGLPRKFN
VAFDGAGRIA ALEDTNDIAF SAVEVKDGFG VAPGVWFRLG LGGITGHKDF AKSTGIIVEP
ERATEVADAI VRLFIETGDR TNRLKARLKY VLDSMGHDKF MEAVESRLGR KLARVADEAI
KPRPEADRMA HIGVHPQKQQ GLNWIGVVLP LGKLTTDQMR ALARIAADLG DGEIRLTVWQ
NLLLPGVRDE NVAMACAAIE QIGLSTKASH IRAGLIACTG NSGCKFAASN TKRHAAEIGD
WCESRVEVDT PLNIHLTGCH HSCAQHYISD IGMIGAKVPV GDGDETVEGY HLFAGGGFGP
QADIGREVYR DLKAEDAPRT VEKLLKAYLA HRLSPDETFL SFARRHDGET LRKLADAQTS
EVAA
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