Gene BBta_4130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4130 
Symbol 
ID5153532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4336980 
End bp4337384 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content68% 
IMG OID640558961 
Producthypothetical protein 
Protein accessionYP_001240099 
Protein GI148255514 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.830739 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTCC ACCCCGCAGG CTCGCGCGCG ACGCGCCGGG CGCCCGCCGA ATACTTCACC 
GGCAACGTGC TGCAGGATCC GCTGATCATG GCGCCGGCAC CGGCACGGCT CAATGCCTCG
CGCGTCTCGT TCGCGCCGGG CGCGCGCACC GCTTGGCACA CCCATCCGCT CGGGCAGACA
CTCTATGTGA TCTCCGGGAT CGGCCGCATC CAGGCCAAGG GCGGACCGGT GCGCGAGATC
CGGCCGGGCG ACGTGATCTT CATCCCGCCG GGTGAGAAGC ACTGGCACGG CGCCTCGCCG
GACAATGAGA TGACGCATAT CGCGATGCAG GAGGCGCTCG ACGGCGTCTA TTCGAACTGG
ATGGAGCACG TCACCGACGA GGAATACGCC ACACCGGTCG GCTGA
 
Protein sequence
MDFHPAGSRA TRRAPAEYFT GNVLQDPLIM APAPARLNAS RVSFAPGART AWHTHPLGQT 
LYVISGIGRI QAKGGPVREI RPGDVIFIPP GEKHWHGASP DNEMTHIAMQ EALDGVYSNW
MEHVTDEEYA TPVG