Gene BBta_4129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4129 
Symbol 
ID5153531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4336007 
End bp4336909 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content69% 
IMG OID640558960 
Producthypothetical protein 
Protein accessionYP_001240098 
Protein GI148255513 
COG category[S] Function unknown 
COG ID[COG4731] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.409896 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGGT TGTTGGCTGT TGCCGCGCTG GTGCTGGCGA GCAGCGCCGC GCACGCGCAA 
TACGTCATCG AATATGGCGG CAACACCATC CGCATCGATC CGGAGCGCGG CACGGTGTCG
ATCCCAGGCG TCTACGACAA TACCGAGCAG AAAAAGGCAA AGAAGACCAA GCGCGAGCAG
GATGCGACGC GCAAATCGCC GGCAGCAGCA GACAAGCCCG CCCAGGCGCC TGCCGAGGCG
GCGGTCACGC CGGCACCTCC GCCTCAGCCG CCAGCGACAG CTGCCACTGC GCCTGCACCC
GCTCCCGCCA CGACAGCTGC CGCCCCCGCA AGCCTGCCAC CGGCGCCAGC TCCGGCGGCG
CCGGTGCAGG CCGCCGCTCC GGCGGTTCCA TTGCCGGCGG CTCCCCTCGA CCCAGTTCCG
CCAGCACAAG CGGTTGCCGC GCCAGTCGCA CCGGCCGCTG CCGCACCCAC GGCAACGGCG
CCGGTGACGC CGCCGGTTGC TCCTGCGGCG GTGCCTGGGC CGGCTCCAGC TCCGTCCGCG
GTCACGACAG CCGCGCTGCC GCCGTCGCCC GCGCCCGCAG CGTCGCAGGA TCCGAACTCG
CCGATCGGCA TCTGGCTGAC GGAGGAGAAG GAAGGCAAGA TCCGCATCGA GCCGTGCGGC
GCCAATCTCT GTGGCTATTC GATCGACGCG AAGACCAACC AGAATGGCGA GCAGATCCTG
ATCAACATGC GCCCGAGCGA CAAGTCGCAG GAGAAGAAGT GGAGCGGCCG CATCTTCGAT
CCCAACAGCG GCAGCACCTA CGATTCGACC ATCGCGTTGA AGGGCTCGAA CAGCCTGCGC
GTGCAGGGCT GCGCCTTTGG CGGCATGTTC TGCGGCGGCC AAACCTGGAC GCGGGTGAAC
TGA
 
Protein sequence
MKRLLAVAAL VLASSAAHAQ YVIEYGGNTI RIDPERGTVS IPGVYDNTEQ KKAKKTKREQ 
DATRKSPAAA DKPAQAPAEA AVTPAPPPQP PATAATAPAP APATTAAAPA SLPPAPAPAA
PVQAAAPAVP LPAAPLDPVP PAQAVAAPVA PAAAAPTATA PVTPPVAPAA VPGPAPAPSA
VTTAALPPSP APAASQDPNS PIGIWLTEEK EGKIRIEPCG ANLCGYSIDA KTNQNGEQIL
INMRPSDKSQ EKKWSGRIFD PNSGSTYDST IALKGSNSLR VQGCAFGGMF CGGQTWTRVN