| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4107 |
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| Symbol | |
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| ID | 5154841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4309695 |
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| End bp | 4312898 |
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| Gene Length | 3204 bp |
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| Protein Length | 1067 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640558941 |
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| Product | AcrB/AcrD/AcrF family mulitdrug efflux protein |
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| Protein accession | YP_001240079 |
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| Protein GI | 148255494 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.666055 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.120279 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGGCCA GGAGGTCGTC GTTCGAGCCG CCGCTTTCGT CAGGCCGGGC GACCGGATCT
TGCCGGTCCG CAGTGATGCC GGATCTGCGG GAGAAGACTG AGATGGCCCT CAACATCTCC
GCCTGGTCGA TTCGGAAACC CATTCCATCG CTGGTGCTAT TTGGCGTCCT GATTGTGCTC
GGTGCGGTCA GCCTGAAGAC CCTGCCGATC ACGCAGATGC CCAATATCGA CATCCCCATC
GTCACCGTCA CGATCGCCCA GACCGGTGCT GCGCCGAGCG AGCTGGAAAC GCAGGTCACG
AAGAACGTCG AAAATGCGGT CACCGGGGTC GTCGGGGCCA AGCACGTCAC GTCGAGCATC
TCTGACGGCG TGTCCGTGAC GACAATCGAG TTCCAACTGG GGACGCCGGC CGATCGTGCG
GTCAATGACG TCCGGAACGC GATGGCGAAT ATCCGGTCGG AGCTGCCGCA GAGCATCGAG
GAACCGTCGA TACAGCGGGT CGAGGTCGGA GGGATGGCCA TCGTCACCTA TGCCGTGTCG
TTTCCCGCTT GGACAGCCGA GCAGGTGTCC TGGTTCGTCG ATGACGTCAT CACGGGAGCT
CTCCAGGGCG TTCGCGGCGT CGCGCAGGTG AAGCGCGCCG GCGGCGCCGA TCGTGAAATC
CGGGTGTCGC TGCAGCCCGA CCGGCTGATC GCGCTCGGCA TCACAGCGGC GGACGTGAAC
GCGCAGCTGC GAGCGACCAA TGTCGATCTC TCCGGCGGGC GCGGTGAAGT GGGGGCGGGA
GAGCAGACCA TACGCATGCT CGCGGGGGCC GCGACGATCG ACGGACTGGC CAATACCGCG
ATCGTGCTGC CCGGCGGCCG AAGGACTGCG TTGAAGGAGA TTGCCACGGT CATCGATGGC
GCGGCCGACG CCCGCAGCTT TGCTCGCCTC GATGGACGAC CGGTGGTCAC CTTTGGTGTC
TTCCGTGCGA AGGGCTTCTC CGACGTGGCC GTCGCAGAGG CCGTCGGGAA GAGATTGGAG
CTACTCGCCA AGGAGCATCC CGATCTGTCC GTATCCGAGA TCGACAGCAC GGTGCGCTAC
ACCAAGTCCG ATTATAGAGC CACCATGCAG ACGTTGACCG AAGGCGCCAT CCTCGCGGTC
GTCGTCGTGC TGATTTTTCT GCGCGACCTT CGCGCGACGG CAATTTCCGT GCTCGCGATA
CCGTTGTCGA TCCTCCCGAC GTTCTGGGTG ATGGACATCA TCGGGTTTTC GCTGAACGCC
GTCAGCCTGC TCGCAATCAC GCTGGTCACC GGCATCCTGG TCGATGATGC GATCGTCGAG
ATCGAGAACA TCGTCCGCCA CATCCGGATG GGCAAATCAG CCTATCGCGC CTCGCTCCAG
GCGGCCGACG AGATCGGACT CGCGGTCGTC GCGACGACCA TGACCATCGT CGCCATGTTC
ATGCCGGTCA GCCTCATGGA CGGCATCGCC GGTCAATACT TCAAGCAGTT CGGCCTCACG
GTCGCCATCG CAGTCACGTT TTCCTTGCTG GTCGCAAGGC TGATCACGCC GCTGCTTGCG
GCATATTTCC TTCGCGCCCC TCAGCGCCAT TCCGAAGGGC ATGGAGTGCT CATGCGGCAC
TATCTCCGCA TGCTCGAATG GTCGCTTCGC CACCGCTTCG TCACGCTCGC GTTTGCTGGC
CTGGTCTTCC TGGGCTCGTT GATGGTCGCA GGCGCCTTGC CGCTCGGCTT TCTGCCAACC
GATGACCTGT CGCGTTCGGT TCTCCTGATC GAGCTGCCAC CGGGCTCGAC GATCGCGGAT
ACCGTGGCCG CCACGGACCG CATCACGGCC CTGCTCAAGA AGCGGCCGGA AGTCAGGAGC
GTCTATGCGG TCGGCGGCAC CGCCGGCGCC CACGGGCTGA GCGTCACCGC GGGTGACGTG
CGCAAGGCCA CCATCATCGT CGACCTCGTT GCGCGCAGCA ACCGGTCGCA CGGCCAGAAG
GCCTTCGAGC ACGACATGCG CGCGGCGCTC GGCGCGATCC CGGATCTTCG CTACAGCTTC
GGCAACGGCG GCGGCGGACG CGAATTCACG CTGATCCTGT CCGGACGCGA TGGCGCCGTG
GTCGAGCAAG CGGCGTTCGC GGTGGAGCGG GACGCCCGGC AGAACGTGTC CGTGCTCGCG
AATGTCGTCT CGACCGTGGC TCTCGCCCGG CCGGAGATTC GCATCCTGCC GAGGCTGGAG
GAGGCTGCCG ATCTTGGAAT CTCCGGGACG CAGATCGCCG AAGTGGCGCG GATTGCGACG
ATCGGCGATG TCTCCGCGCG TCTGGCGAAG TTCTCGGCCG TCGACCGCCA AGTGCCAATC
CGCGTGCAGC TCGACGAGCG AGCTCGAGGC GATCTATCGA CCCTTGATAT GCTGCGGATC
AAAGCCAGGA ACGGCACCGT ACCGCTGGCC ACGGTCGCCG AAATCGGCTT TGGCGAGGGG
CCGATGACCA TCGAACGCTA TGACGGCAGG CGTCGCGTCG CCATCGAGGC CGACCTCGTC
GGAAGCACCC CGCTGGGCGA GGCCATCGCG CAAGTGATGG CGCTGCCCTC GGCACGCAAC
CTGCCCGCCG GCGTGACGAT TGCGAGGTTC GGCGATTCAG AGATCATGGA CGACGTGTTT
TCGAGTTTTT CGTTCGCGAT CGCTGCCGGG GTACTCATGG TGCTCGCCGT CCTCGTTCTG
CTCTTCGCCG ACGCGATGCA TCCGATCACC ATCATCTTCT CCATGCCGCT GTCGATCGGC
GGAGCGCTGC TTGCGCTGCT GCTGGCCGGC CATGCCATCA ACCTCTCGGC CATTATCGGA
TTCCTCATGC TCATGGGAAT CGTGACGAAA AATGCGATCC TGCTCGTGGA CTTCGCCATC
ACAGAGGTCG CGAGCGGCGT CGAACGCACG ACGGCGTTGC TCGAAGCCGG CCGCAAGCGC
GCTCAACCCG TGATCATGAC GACAGCGGCC ATGACGGCAG GGATGGTTCC TTCTGCATTG
GGGCTCGGCG ACGGCGGCGC GTTCCGTTCC CCCATGGCGG TCGCATTGAT CGGCGGGCTG
CTCGCCTCGA CCTTTCTCAG CCTTGTCTTC GTGCCGGCCG CCTTTACGAT CATGGACGAT
TTCGGCCGGC TTCTCGACAG CAAGCTCTCG CGCTTCATCG GACCGAAGGA CGACATCAAG
CTCTTGGGCA ATTCTCAGGT CTGA
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| Protein sequence | MKARRSSFEP PLSSGRATGS CRSAVMPDLR EKTEMALNIS AWSIRKPIPS LVLFGVLIVL
GAVSLKTLPI TQMPNIDIPI VTVTIAQTGA APSELETQVT KNVENAVTGV VGAKHVTSSI
SDGVSVTTIE FQLGTPADRA VNDVRNAMAN IRSELPQSIE EPSIQRVEVG GMAIVTYAVS
FPAWTAEQVS WFVDDVITGA LQGVRGVAQV KRAGGADREI RVSLQPDRLI ALGITAADVN
AQLRATNVDL SGGRGEVGAG EQTIRMLAGA ATIDGLANTA IVLPGGRRTA LKEIATVIDG
AADARSFARL DGRPVVTFGV FRAKGFSDVA VAEAVGKRLE LLAKEHPDLS VSEIDSTVRY
TKSDYRATMQ TLTEGAILAV VVVLIFLRDL RATAISVLAI PLSILPTFWV MDIIGFSLNA
VSLLAITLVT GILVDDAIVE IENIVRHIRM GKSAYRASLQ AADEIGLAVV ATTMTIVAMF
MPVSLMDGIA GQYFKQFGLT VAIAVTFSLL VARLITPLLA AYFLRAPQRH SEGHGVLMRH
YLRMLEWSLR HRFVTLAFAG LVFLGSLMVA GALPLGFLPT DDLSRSVLLI ELPPGSTIAD
TVAATDRITA LLKKRPEVRS VYAVGGTAGA HGLSVTAGDV RKATIIVDLV ARSNRSHGQK
AFEHDMRAAL GAIPDLRYSF GNGGGGREFT LILSGRDGAV VEQAAFAVER DARQNVSVLA
NVVSTVALAR PEIRILPRLE EAADLGISGT QIAEVARIAT IGDVSARLAK FSAVDRQVPI
RVQLDERARG DLSTLDMLRI KARNGTVPLA TVAEIGFGEG PMTIERYDGR RRVAIEADLV
GSTPLGEAIA QVMALPSARN LPAGVTIARF GDSEIMDDVF SSFSFAIAAG VLMVLAVLVL
LFADAMHPIT IIFSMPLSIG GALLALLLAG HAINLSAIIG FLMLMGIVTK NAILLVDFAI
TEVASGVERT TALLEAGRKR AQPVIMTTAA MTAGMVPSAL GLGDGGAFRS PMAVALIGGL
LASTFLSLVF VPAAFTIMDD FGRLLDSKLS RFIGPKDDIK LLGNSQV
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