Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4106 |
Symbol | |
ID | 5154889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 4307611 |
End bp | 4308462 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640558939 |
Product | hypothetical protein |
Protein accession | YP_001240078 |
Protein GI | 148255493 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0797] Lipoproteins |
TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.322542 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.202617 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGCGA ATTGCGCCTC GTCGAACAAA TTCGCCAGCA AGGTCGATCC GAAATACGGC GTGTCGTCGA GCCCGCGCGT GGTCGGCTTC GGCGAGCCGG TGCCGAAGGG CGGTGGTGTC TACCGGGTCG GCAAGCCCTA TACCGTCGCC GGCAAGACCT ATGTGCCCGA AGAAGACACC AATTATCGCG CCGAAGGCAT GGCATCCTGG TATGGCGATG ACTTCCACGG GCGCCTGACC GCCAATGGCG AGGTGTTCGA CATGGCCTCG CTGACGGCGG CGCATCCGAC CCTGCCGATG CCGAGCTATG CCCGGGTCAC CAACCTCGCC AATGGCAAAT CGCTCATCGT CCGCGTCAAC GATCGCGGCC CGTATCATGC CAACCGGTTG ATCGACGTCT CCAACAAGGC GGCTGACCTG CTCGAGTTCA AGGGCACCGG CGTCGCCCGC GTGCGCGTCG AATATGTCGG CCGCGCCCCC CTGGAGGGGT CCGACGACGT CCAGCTGATG GCGACCTTGC GCACGGGCAT CCCGGCGCCG GCGCCGTCCC TGGTCCGCGT CGCCTCGGCC AAGCCGTTCG TGCCGGACGT CGGCGCGGGC CGGCCGATTC GCGGCGAGGT CCCGCTGCCG GAGGGCCGTC CCTATACGCT GGGCAATGGC TCGGCCGACC TGGCCTCGAT CGCCGCAACG TCGGAAATGT CGGCGTCCAG CAGGACGCGG GGGCGGAGCC TCGATAATCC GCGCGCCGTC TCCTATGATC AGAACGGCCG CTACGCCGCG CAGGGCAGGG CAGAGGCCAA TGATGGCGCC GACGAAGCCC GAGACATCAT GAGCGGTCGC GGGCTGTACT GA
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Protein sequence | MVANCASSNK FASKVDPKYG VSSSPRVVGF GEPVPKGGGV YRVGKPYTVA GKTYVPEEDT NYRAEGMASW YGDDFHGRLT ANGEVFDMAS LTAAHPTLPM PSYARVTNLA NGKSLIVRVN DRGPYHANRL IDVSNKAADL LEFKGTGVAR VRVEYVGRAP LEGSDDVQLM ATLRTGIPAP APSLVRVASA KPFVPDVGAG RPIRGEVPLP EGRPYTLGNG SADLASIAAT SEMSASSRTR GRSLDNPRAV SYDQNGRYAA QGRAEANDGA DEARDIMSGR GLY
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