Gene BBta_4106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4106 
Symbol 
ID5154889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4307611 
End bp4308462 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content68% 
IMG OID640558939 
Producthypothetical protein 
Protein accessionYP_001240078 
Protein GI148255493 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.322542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.202617 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCGA ATTGCGCCTC GTCGAACAAA TTCGCCAGCA AGGTCGATCC GAAATACGGC 
GTGTCGTCGA GCCCGCGCGT GGTCGGCTTC GGCGAGCCGG TGCCGAAGGG CGGTGGTGTC
TACCGGGTCG GCAAGCCCTA TACCGTCGCC GGCAAGACCT ATGTGCCCGA AGAAGACACC
AATTATCGCG CCGAAGGCAT GGCATCCTGG TATGGCGATG ACTTCCACGG GCGCCTGACC
GCCAATGGCG AGGTGTTCGA CATGGCCTCG CTGACGGCGG CGCATCCGAC CCTGCCGATG
CCGAGCTATG CCCGGGTCAC CAACCTCGCC AATGGCAAAT CGCTCATCGT CCGCGTCAAC
GATCGCGGCC CGTATCATGC CAACCGGTTG ATCGACGTCT CCAACAAGGC GGCTGACCTG
CTCGAGTTCA AGGGCACCGG CGTCGCCCGC GTGCGCGTCG AATATGTCGG CCGCGCCCCC
CTGGAGGGGT CCGACGACGT CCAGCTGATG GCGACCTTGC GCACGGGCAT CCCGGCGCCG
GCGCCGTCCC TGGTCCGCGT CGCCTCGGCC AAGCCGTTCG TGCCGGACGT CGGCGCGGGC
CGGCCGATTC GCGGCGAGGT CCCGCTGCCG GAGGGCCGTC CCTATACGCT GGGCAATGGC
TCGGCCGACC TGGCCTCGAT CGCCGCAACG TCGGAAATGT CGGCGTCCAG CAGGACGCGG
GGGCGGAGCC TCGATAATCC GCGCGCCGTC TCCTATGATC AGAACGGCCG CTACGCCGCG
CAGGGCAGGG CAGAGGCCAA TGATGGCGCC GACGAAGCCC GAGACATCAT GAGCGGTCGC
GGGCTGTACT GA
 
Protein sequence
MVANCASSNK FASKVDPKYG VSSSPRVVGF GEPVPKGGGV YRVGKPYTVA GKTYVPEEDT 
NYRAEGMASW YGDDFHGRLT ANGEVFDMAS LTAAHPTLPM PSYARVTNLA NGKSLIVRVN
DRGPYHANRL IDVSNKAADL LEFKGTGVAR VRVEYVGRAP LEGSDDVQLM ATLRTGIPAP
APSLVRVASA KPFVPDVGAG RPIRGEVPLP EGRPYTLGNG SADLASIAAT SEMSASSRTR
GRSLDNPRAV SYDQNGRYAA QGRAEANDGA DEARDIMSGR GLY