Gene BBta_4097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4097 
Symbol 
ID5155154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4297346 
End bp4297975 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content67% 
IMG OID640558930 
Producthypothetical protein 
Protein accessionYP_001240069 
Protein GI148255484 
COG category[R] General function prediction only 
COG ID[COG2329] Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0235678 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTCGC TGTTCTTCGA GGTCGAGGTC AAGCCGGGCC GGCTCGATCA GTATCTGCAG 
CTCGCCGCCG CGCTGCGGCC GGAGCTCGAT GCGCTCGGCG GCTGCCTGTT CCTCGACCGT
TTCCGGAGCC TGTCGCGCGA CAACCTGATC CTGTCCTATC AGATCTGGCA GGACGAGGGC
GCCATGACCG CCTGGCGCGT CCACGCCCAT CACCACGACA TCCAGACGCT CGGCCGCGAC
AAGGTGTTCT CCGACTACCG CCTGCGCGTC GCCGAGATGG CCCACGAGGT AAAGCCAGGG
CATGCGGCCT GGCAGCCGGA GCGGCGAGGC ACCTACAATG ATCCGAAGCG GCGTGCGCCG
ACCTATGTGC TGGCCGTCGA GACGGCGGCC CCGCAATTGA GCGGCGTGAA GGACCTGCCG
GTCGCGAGCT TCTCCAGCGT CTACCGGGAA GGACGCTTCG CGCATCTCGT CGAATTGCCG
GACGAGCCGA CCGGCCTCGC GCTGAGCACG CAGCTGCTCG CCGAGCCCGA CGTCGACAAC
ATCCGCGTCG TCGAAGTCAC TCGCGACTAC GGCATGTACG ACCGCCGCGA GGCGCCGCAA
TTTTATCCCG AGAAGAGCAG GGATATCTAA
 
Protein sequence
MLSLFFEVEV KPGRLDQYLQ LAAALRPELD ALGGCLFLDR FRSLSRDNLI LSYQIWQDEG 
AMTAWRVHAH HHDIQTLGRD KVFSDYRLRV AEMAHEVKPG HAAWQPERRG TYNDPKRRAP
TYVLAVETAA PQLSGVKDLP VASFSSVYRE GRFAHLVELP DEPTGLALST QLLAEPDVDN
IRVVEVTRDY GMYDRREAPQ FYPEKSRDI