Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4090 |
Symbol | |
ID | 5154156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 4287946 |
End bp | 4288821 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640558923 |
Product | branched chain amino acid ABC transporter permease |
Protein accession | YP_001240062 |
Protein GI | 148255477 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00306357 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.062323 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTTCT GGCAGATCTT GATTGATGGC TTCGCCATCA GCGCGCTGTA TGCGCTCGGC GCGACCGGCT TCACGCTCAT CTTCGGCGTT TCGGGCGTGC TCAACCTCTC TCACGGCGCC ATCATGGTGG GCGCCGCGGT CGCAGCCTGG GCGGCCGCCA GCGAATTCGG CGTCGGGCCC TACACCGGCG CGCTGATCGG CATCCTCGCC GGCTTCATCT TGGCCTTCGC CACCTACTTC ATCGCCGTCA GGCCGATCCA GCGCTCCAAG GCGATCGCCG AGTCGGAGAA GGAGATCTTC ATCCTGACCG CGACGCTGCT CTGGGGCATC ATCACCCAGG AGGCGATCGC CTATCTGTTC ACCAACAACG CCAAGACCGT GCTGCCGATC GTCGAGGGTG TCACCACGGT GTTTGGGGTG CGGACGCCGC GGAACGAGTA CTTCACCGCC GTGATCTGCT GGGTCGCGAT CGGGCTGTTG TGGTTCCTGG TCAACCGCAC GCGACGCGGC AAGTCCGTCA TGGCCGCCTC GATGAACCCA CGTGGCGTCA CCTTGCTCGG CATTGAATTG TCGTCGATCT ACCTCACGGT CTGGGCGATC TACGGGCTGC TGGCCGGCGT CGCGGGAATC CTGCTTGGGA TGTTCCTGGG CGTCAGCTCC TACAGCGTCG GGCCGCTGAC GGCGAGCGCG TTTTCGATCG TCGTGCTCGG CGGCCTCGGC AGCGTCTCCG GCTCGCTGAT CGCGGCCTAT GTGGTGGGCT ATCTCGAGAC CGGCACGGCC TATCTGATCT CGCCGGCCTA CCGGACGATC CCGGCGCTGC TGCTGCTCGT GGTCGTCATG TATCTGCGCC CGCAAGGGCT GTTCGGGCGG AGGTGA
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Protein sequence | MLFWQILIDG FAISALYALG ATGFTLIFGV SGVLNLSHGA IMVGAAVAAW AAASEFGVGP YTGALIGILA GFILAFATYF IAVRPIQRSK AIAESEKEIF ILTATLLWGI ITQEAIAYLF TNNAKTVLPI VEGVTTVFGV RTPRNEYFTA VICWVAIGLL WFLVNRTRRG KSVMAASMNP RGVTLLGIEL SSIYLTVWAI YGLLAGVAGI LLGMFLGVSS YSVGPLTASA FSIVVLGGLG SVSGSLIAAY VVGYLETGTA YLISPAYRTI PALLLLVVVM YLRPQGLFGR R
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