| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4090 |
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| Symbol | |
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| ID | 5154156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 4287946 |
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| End bp | 4288821 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640558923 |
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| Product | branched chain amino acid ABC transporter permease |
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| Protein accession | YP_001240062 |
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| Protein GI | 148255477 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00306357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.062323 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTTCT GGCAGATCTT GATTGATGGC TTCGCCATCA GCGCGCTGTA TGCGCTCGGC
GCGACCGGCT TCACGCTCAT CTTCGGCGTT TCGGGCGTGC TCAACCTCTC TCACGGCGCC
ATCATGGTGG GCGCCGCGGT CGCAGCCTGG GCGGCCGCCA GCGAATTCGG CGTCGGGCCC
TACACCGGCG CGCTGATCGG CATCCTCGCC GGCTTCATCT TGGCCTTCGC CACCTACTTC
ATCGCCGTCA GGCCGATCCA GCGCTCCAAG GCGATCGCCG AGTCGGAGAA GGAGATCTTC
ATCCTGACCG CGACGCTGCT CTGGGGCATC ATCACCCAGG AGGCGATCGC CTATCTGTTC
ACCAACAACG CCAAGACCGT GCTGCCGATC GTCGAGGGTG TCACCACGGT GTTTGGGGTG
CGGACGCCGC GGAACGAGTA CTTCACCGCC GTGATCTGCT GGGTCGCGAT CGGGCTGTTG
TGGTTCCTGG TCAACCGCAC GCGACGCGGC AAGTCCGTCA TGGCCGCCTC GATGAACCCA
CGTGGCGTCA CCTTGCTCGG CATTGAATTG TCGTCGATCT ACCTCACGGT CTGGGCGATC
TACGGGCTGC TGGCCGGCGT CGCGGGAATC CTGCTTGGGA TGTTCCTGGG CGTCAGCTCC
TACAGCGTCG GGCCGCTGAC GGCGAGCGCG TTTTCGATCG TCGTGCTCGG CGGCCTCGGC
AGCGTCTCCG GCTCGCTGAT CGCGGCCTAT GTGGTGGGCT ATCTCGAGAC CGGCACGGCC
TATCTGATCT CGCCGGCCTA CCGGACGATC CCGGCGCTGC TGCTGCTCGT GGTCGTCATG
TATCTGCGCC CGCAAGGGCT GTTCGGGCGG AGGTGA
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| Protein sequence | MLFWQILIDG FAISALYALG ATGFTLIFGV SGVLNLSHGA IMVGAAVAAW AAASEFGVGP
YTGALIGILA GFILAFATYF IAVRPIQRSK AIAESEKEIF ILTATLLWGI ITQEAIAYLF
TNNAKTVLPI VEGVTTVFGV RTPRNEYFTA VICWVAIGLL WFLVNRTRRG KSVMAASMNP
RGVTLLGIEL SSIYLTVWAI YGLLAGVAGI LLGMFLGVSS YSVGPLTASA FSIVVLGGLG
SVSGSLIAAY VVGYLETGTA YLISPAYRTI PALLLLVVVM YLRPQGLFGR R
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