Gene BBta_4081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4081 
Symbol 
ID5155668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4279053 
End bp4279778 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content65% 
IMG OID640558914 
Producthypothetical protein 
Protein accessionYP_001240053 
Protein GI148255468 
COG category[R] General function prediction only 
COG ID[COG0603] Predicted PP-loop superfamily ATPase 
TIGRFAM ID[TIGR00364] exsB protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.10666 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATGA GCGACACGCA TGACATGACG GCCCTGGTGC TGTTCTCGGG CGGGCAGGAT 
TCCACGACCT GCCTGGCCTG GGCGCTCGAC CGCTTCGCAC GCATCGAGAC GATCGGCTTC
GATTACGGTC AGCGCCATGC GATCGAGCTC GATTGCCGGG CCCGTCTGCT GGACGGACTT
GCGCAGCTGC GGCCGGAATG GGCCGGTAAG CTCGGCGATG GTCACACGCT GGAGATTCCA
ACGCTGTCCG CGATCTCCGA GACCGCGCTG ACGCGCGATG TCGCGATCGA GATGGGCGCC
GATGGCCTGC CCAATACGTT CGTCCCAGGC CGCAACCTGG TGTTCCTGAC CTTCGCCGCC
GCCTTGGCCT ATCGGCGCGG CATCAGCCAC ATTGTCGGCG GCATGTGCGA GACGGATTAT
TCCGGCTATC CCGACTGCCG CGACGAGACC ATCAAGGCGC TGCAGGGTGC GCTCAGCCTC
GGCATGGCGC GCCCCTTCGA GCTGCACACG CCGTTGATGT GGCTCTCCAA GGCGGCGACA
TGGCAGCTGG CCTATGATCT CGGCGGAAGA GATCTGGTCG ACCTGATCCG GGATCAGTCA
CACACCTGCT ATCTCGGTGA GCGAGGTGCG CGCCACGATT GGGGCTATGG CTGCGGTGCG
TGCCCCGCTT GCGATCTGCG CGCCAGAGGA TGGCACGAAT ACATCGCAGG GAGCGCACAG
TCCTGA
 
Protein sequence
MQMSDTHDMT ALVLFSGGQD STTCLAWALD RFARIETIGF DYGQRHAIEL DCRARLLDGL 
AQLRPEWAGK LGDGHTLEIP TLSAISETAL TRDVAIEMGA DGLPNTFVPG RNLVFLTFAA
ALAYRRGISH IVGGMCETDY SGYPDCRDET IKALQGALSL GMARPFELHT PLMWLSKAAT
WQLAYDLGGR DLVDLIRDQS HTCYLGERGA RHDWGYGCGA CPACDLRARG WHEYIAGSAQ
S